Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6-181P-201ENST00000363225 107 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RNU5A-8P-201ENST00000364102 114 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RNU6-282P-201ENST00000365357 103 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC068538.1-201ENST00000376856 336 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 Y_RNA.409-201ENST00000383990 98 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RNU6-432P-201ENST00000384196 109 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RNU6-456P-201ENST00000384493 107 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 MIR19A-201ENST00000384878 82 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RPL21P67-201ENST00000402896 478 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 SNORA11-201ENST00000408789 128 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 MTND1P21-201ENST00000412991 285 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC010655.1-201ENST00000449336 292 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC108059.3-201ENST00000456388 214 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 snoU13.3-201ENST00000459441 104 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 RNU6-445P-201ENST00000516949 107 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 SUB1P2-201ENST00000556401 297 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC234778.2-201ENST00000566241 354 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AL109618.2-201ENST00000605527 211 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC131238.1-201ENST00000617135 328 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 MIR6758-201ENST00000620653 63 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC244517.1-201ENST00000606030 2086 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 AC074029.4-201ENST00000624796 1859 ntBASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.03□□□□□ -1.6
SYNPOQ8N3V7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 RPL32P3-201ENST00000359025 275 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 RPL7P57-201ENST00000423238 740 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 MTND1P9-201ENST00000453775 944 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC245028.2-201ENST00000458673 253 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC091180.1-201ENST00000462104 372 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC092989.1-201ENST00000481235 277 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 RPS3AP50-201ENST00000487064 803 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC023194.1-201ENST00000493084 308 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 HMGB1P29-201ENST00000505659 499 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC093824.1-201ENST00000508796 343 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC010342.1-201ENST00000514047 877 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 RNA5SP337-201ENST00000517007 109 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC103783.1-201ENST00000520506 373 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 HMGN1P28-201ENST00000521340 364 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 OR4T1P-201ENST00000554933 911 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 Z84480.1-201ENST00000605131 311 ntBASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SYNPOQ8N3V7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 OR1S2-201ENST00000302592 978 ntBASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 SNORA70F-201ENST00000384142 135 ntBASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 MTND3P17-201ENST00000416968 344 ntBASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 CCDC58P2-201ENST00000417131 366 ntBASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 MTCO2P11-201ENST00000431069 680 ntBASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.01□□□□□ -1.61
SYNPOQ8N3V7 AC016831.4-201ENST00000438302 307 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms