Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNA5SP391-201ENST00000363456 119 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 RNA5SP234-201ENST00000363916 119 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MIR1302-3-201ENST00000408128 138 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MIR548F4-201ENST00000408515 105 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MTCYBP10-201ENST00000424905 650 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 HMGB3P11-201ENST00000440127 604 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL731563.1-201ENST00000442202 214 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL035666.1-201ENST00000446195 348 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 EEF1A1P1-201ENST00000447052 739 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MTND1P17-201ENST00000448961 204 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC091685.2-201ENST00000454924 864 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 SNORD97-201ENST00000459187 142 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 FTH1P24-201ENST00000503502 462 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MTND4LP22-201ENST00000508209 276 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 RN7SKP295-201ENST00000517264 153 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 HMGB1P19-201ENST00000517578 577 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC023442.1-201ENST00000531247 422 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 OR5D15P-201ENST00000531671 942 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC092470.1-201ENST00000546187 132 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL049779.2-201ENST00000553847 315 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC022404.1-201ENST00000555320 273 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC110588.1-201ENST00000559699 137 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC015720.2-201ENST00000567709 334 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 MIR4433B-201ENST00000581329 102 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL670379.11-201ENST00000604059 253 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL670379.10-201ENST00000604330 253 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL670379.12-201ENST00000605291 253 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL670379.9-201ENST00000605428 253 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 Z82243.1-201ENST00000609432 473 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC083806.3-201ENST00000614016 455 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC090510.2-201ENST00000617465 629 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC008013.2-202ENST00000637965 364 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 OR52H1-202ENST00000641796 1061 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AC103710.2-202ENST00000641454 2853 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
UBE3DQ7Z6J8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC244517.1-201ENST00000606030 2086 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-574P-201ENST00000384265 107 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-308P-201ENST00000390957 107 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 SNORA17A-201ENST00000391185 133 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 CISD1P1-201ENST00000393907 327 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RNU6-985P-201ENST00000410182 104 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 Y_RNA.605-201ENST00000410577 105 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RNU2-15P-201ENST00000410692 191 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC009310.1-201ENST00000414414 451 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RPL35AP22-201ENST00000436855 335 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL353691.1-201ENST00000451332 387 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC023141.9-201ENST00000458734 412 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC004801.2-202ENST00000463559 283 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 COX7A2P2-201ENST00000505291 250 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 COX6CP5-201ENST00000527162 228 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL133153.1-201ENST00000557756 303 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC005341.1-201ENST00000571086 708 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 SNORD95-201ENST00000579879 68 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC010632.3-201ENST00000611377 369 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL590099.1-201ENST00000615276 138 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL357559.1-201ENST00000622228 274 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AL161637.1-201ENST00000622380 412 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 AC025034.2-201ENST00000623264 286 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 SNORA17.5-201ENST00000630429 132 ntBASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.19□□□□□ -1.58
UBE3DQ7Z6J8 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms