Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RN7SKP234-201ENST00000517173 224 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC006064.5-201ENST00000541782 248 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 MIR4307-201ENST00000582802 84 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC078795.2-201ENST00000602835 1252 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AL390208.1-201ENST00000605885 644 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AL139286.2-201ENST00000606838 396 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC008121.2-201ENST00000614647 523 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC008785.1-201ENST00000624475 456 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AP000843.1-201ENST00000624880 701 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 AC084035.1-201ENST00000634543 607 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SHFQ7M4L6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 OR56B2P-202ENST00000641377 2453 ntBASIC3.82□□□□□ -1.8
SHFQ7M4L6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHFQ7M4L6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 NOL8P1-201ENST00000508336 3529 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 DHX40P1-201ENST00000588725 1412 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 RNA5SP322-201ENST00000363617 119 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 RNU5E-5P-201ENST00000365379 116 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL663109.1-201ENST00000411498 844 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 RPL31P45-201ENST00000419532 356 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MTCO2P5-201ENST00000422621 426 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC007742.1-201ENST00000425789 329 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 PSMA6P3-201ENST00000428242 164 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 USP9YP9-201ENST00000429406 715 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL590233.1-201ENST00000430017 456 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC109583.1-201ENST00000432156 268 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 RPS6P12-201ENST00000432491 726 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 ELOCP26-201ENST00000436067 329 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 DHFRP3-201ENST00000455595 559 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 CFTRP1-201ENST00000456646 183 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 BTF3P5-201ENST00000457252 467 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 PGBD4P4-201ENST00000509673 613 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 FABP5P5-201ENST00000515537 406 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 AP002748.2-201ENST00000528671 348 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL139174.1-201ENST00000531489 886 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 OR5D15P-201ENST00000531671 942 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC022880.1-201ENST00000534017 973 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AL109766.1-201ENST00000555080 552 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC084783.1-201ENST00000565846 910 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MIR5697-201ENST00000578045 78 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 MIR4436B2-201ENST00000581415 91 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MIR4436B1-201ENST00000583272 91 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC008782.1-201ENST00000603386 430 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AP003117.2-201ENST00000606010 545 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC104073.3-201ENST00000610942 955 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC093591.3-201ENST00000634516 308 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MIR4496-201ENST00000635896 61 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 Z82217.1-201ENST00000625157 8149 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC007390.2-201ENST00000606229 3803 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 NUP58P1-201ENST00000502546 1738 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
SHFQ7M4L6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHFQ7M4L6 AC097714.1-201ENST00000511272 1647 ntBASIC3.81□□□□□ -1.8
SHFQ7M4L6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AL592437.2-201ENST00000421655 2434 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms