Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RPL31P45-201ENST00000419532 356 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 GLRXP1-201ENST00000423261 334 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 MTCYBP5-201ENST00000423752 1135 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC104651.1-201ENST00000427559 735 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AL590233.1-201ENST00000430017 456 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RPL23AP25-201ENST00000430973 463 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 MTATP6P13-201ENST00000438531 667 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RABEPKP1-201ENST00000440529 1026 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RPL21P133-201ENST00000443666 476 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC098824.1-201ENST00000453565 980 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 Z82190.1-201ENST00000454534 490 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RN7SL385P-201ENST00000468873 276 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC087385.1-201ENST00000475062 312 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RPL23AP65-201ENST00000475608 468 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC126182.1-201ENST00000478134 357 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AP001025.2-201ENST00000490908 477 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AP003467.2-201ENST00000520175 319 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC016957.1-201ENST00000534895 309 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 ZNF519P2-201ENST00000557032 169 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC084783.1-201ENST00000565846 910 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC008782.1-201ENST00000603386 430 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RBM11P1-201ENST00000604951 799 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC010857.1-201ENST00000606398 594 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AP002360.3-201ENST00000607673 710 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC091965.4-201ENST00000607691 587 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 ASNSP1-201ENST00000518311 1939 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 AC125257.1-201ENST00000560400 2930 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 RAD17P1-201ENST00000418130 2042 ntBASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD3Q3KNS1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 IQCB2P-201ENST00000401788 1633 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC004690.1-201ENST00000418216 328 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 NANOGP6-201ENST00000429190 847 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AP001992.1-205ENST00000462248 379 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 RPL21P126-201ENST00000470049 478 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AL358832.1-201ENST00000497800 389 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 MTND4LP26-201ENST00000518144 282 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC137800.2-201ENST00000574375 120 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 MIR3682-201ENST00000581338 84 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AC008250.2-201ENST00000615261 205 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 U4.5-201ENST00000617137 123 ntBASIC4.37□□□□□ -1.71
PTCHD3Q3KNS1 AL596245.1-201ENST00000618994 362 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms