Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.26□□□□□ -2.05
LSM3P62310 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LSM3P62310 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LSM3P62310 AC233263.6-201ENST00000631132 1963 ntBASIC2.26□□□□□ -2.05
LSM3P62310 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.26□□□□□ -2.05
LSM3P62310 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LSM3P62310 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.26□□□□□ -2.05
LSM3P62310 AC000403.1-201ENST00000613696 3585 ntBASIC2.25□□□□□ -2.05
LSM3P62310 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.25□□□□□ -2.05
LSM3P62310 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 RNU6-618P-201ENST00000363518 112 ntBASIC2.25□□□□□ -2.05
LSM3P62310 RNU1-112P-201ENST00000364401 164 ntBASIC2.25□□□□□ -2.05
LSM3P62310 RNA5SP515-201ENST00000364570 118 ntBASIC2.25□□□□□ -2.05
LSM3P62310 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 SNORA57.1-201ENST00000391227 145 ntBASIC2.25□□□□□ -2.05
LSM3P62310 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LSM3P62310 AL138827.1-201ENST00000402666 306 ntBASIC2.25□□□□□ -2.05
LSM3P62310 NUP35P2-201ENST00000416748 943 ntBASIC2.25□□□□□ -2.05
LSM3P62310 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.25□□□□□ -2.05
LSM3P62310 AC005326.1-201ENST00000429197 123 ntBASIC2.25□□□□□ -2.05
LSM3P62310 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 AL159987.2-201ENST00000432754 307 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AC009220.1-201ENST00000451614 275 ntBASIC2.25□□□□□ -2.05
LSM3P62310 RPS4XP6-201ENST00000477670 797 ntBASIC2.25□□□□□ -2.05
LSM3P62310 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 RN7SL504P-201ENST00000494496 287 ntBASIC2.25□□□□□ -2.05
LSM3P62310 VN1R104P-201ENST00000505115 1009 ntBASIC2.25□□□□□ -2.05
LSM3P62310 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 HMGB1P22-201ENST00000505315 124 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AC034244.2-201ENST00000514668 858 ntBASIC2.25□□□□□ -2.05
LSM3P62310 SNORD59.2-201ENST00000516873 68 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 CIR1P1-201ENST00000524055 1133 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 OR5BN1P-201ENST00000532955 829 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM3P62310 MIR548Y-201ENST00000582739 110 ntBASIC2.25□□□□□ -2.05
LSM3P62310 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.25□□□□□ -2.05
LSM3P62310 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.25□□□□□ -2.05
LSM3P62310 AC068724.3-201ENST00000625906 87 ntBASIC2.25□□□□□ -2.05
LSM3P62310 MIR4496-201ENST00000635896 61 ntBASIC2.25□□□□□ -2.05
LSM3P62310 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 AP001350.1-201ENST00000601906 1524 ntBASIC2.25□□□□□ -2.05
LSM3P62310 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM3P62310 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LSM3P62310 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
LSM3P62310 MTCO1P24-201ENST00000515438 1558 ntBASIC2.24□□□□□ -2.05
LSM3P62310 MTCO1P12-201ENST00000414273 1543 ntBASIC2.24□□□□□ -2.05
LSM3P62310 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LSM3P62310 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
LSM3P62310 CD24P4-201ENST00000382840 243 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AL356057.3-201ENST00000402607 340 ntBASIC2.24□□□□□ -2.05
LSM3P62310 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.24□□□□□ -2.05
LSM3P62310 RNA5SP498-201ENST00000411342 120 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC080125.1-201ENST00000414888 684 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM3P62310 RPS24P8-201ENST00000431490 402 ntBASIC2.24□□□□□ -2.05
LSM3P62310 MED6P1-201ENST00000439659 713 ntBASIC2.24□□□□□ -2.05
LSM3P62310 BUD31P2-201ENST00000449374 300 ntBASIC2.24□□□□□ -2.05
LSM3P62310 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM3P62310 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LSM3P62310 AC010285.3-201ENST00000511668 676 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC112673.1-201ENST00000513168 575 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM3P62310 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM3P62310 OR5AK3P-201ENST00000527486 1297 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC125611.2-201ENST00000551907 647 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC078814.3-201ENST00000553036 491 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC090695.1-201ENST00000561269 1222 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM3P62310 FAM60CP-201ENST00000591086 664 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM3P62310 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM3P62310 MIR6864-201ENST00000617935 70 ntBASIC2.24□□□□□ -2.05
LSM3P62310 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM3P62310 AP000676.4-201ENST00000624659 623 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM3P62310 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM3P62310 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LSM3P62310 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LSM3P62310 TAB3P1-202ENST00000452645 1634 ntBASIC2.24□□□□□ -2.05
LSM3P62310 AL049781.1-201ENST00000623195 3585 ntBASIC2.24□□□□□ -2.05
LSM3P62310 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LSM3P62310 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM3P62310 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LSM3P62310 SNORA18.3-201ENST00000384122 132 ntBASIC2.23□□□□□ -2.05
LSM3P62310 MIR141-201ENST00000384975 95 ntBASIC2.23□□□□□ -2.05
LSM3P62310 U3.19-201ENST00000390893 196 ntBASIC2.23□□□□□ -2.05
LSM3P62310 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms