Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.43□□□□□ -1.86
CLTCL1P53675 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLTCL1P53675 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.43□□□□□ -1.86
CLTCL1P53675 AC009977.1-201ENST00000586015 570 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.43□□□□□ -1.86
CLTCL1P53675 AC068313.1-201ENST00000604028 1008 ntBASIC3.43□□□□□ -1.86
CLTCL1P53675 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.43□□□□□ -1.86
CLTCL1P53675 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLTCL1P53675 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
CLTCL1P53675 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLTCL1P53675 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLTCL1P53675 RN7SKP44-201ENST00000363602 316 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLTCL1P53675 MIR1289-2-201ENST00000408360 111 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 SNORD88.1-201ENST00000408684 91 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 RNU4-26P-201ENST00000410270 107 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 AL513175.2-201ENST00000422071 443 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 HMGB3P12-201ENST00000438745 556 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.42□□□□□ -1.86
CLTCL1P53675 AC104389.3-201ENST00000445629 235 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 IGKV2-36-201ENST00000519999 223 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.42□□□□□ -1.86
CLTCL1P53675 DEFB122-202ENST00000569013 197 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 AL137072.1-201ENST00000603444 466 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 AC025811.1-201ENST00000604312 472 ntBASIC3.42□□□□□ -1.86
CLTCL1P53675 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLTCL1P53675 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CLTCL1P53675 MTCO2P17-201ENST00000424336 677 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AL357520.1-201ENST00000441557 453 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AC096638.1-201ENST00000444678 216 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.41□□□□□ -1.86
CLTCL1P53675 OR4G11P-201ENST00000492842 939 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 RNU6-991P-201ENST00000516168 107 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.41□□□□□ -1.86
CLTCL1P53675 AC009063.1-201ENST00000563342 702 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.41□□□□□ -1.86
CLTCL1P53675 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLTCL1P53675 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CLTCL1P53675 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.41□□□□□ -1.86
CLTCL1P53675 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLTCL1P53675 AC004925.1-201ENST00000624256 2706 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLTCL1P53675 AL590103.1-201ENST00000434488 307 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CLTCL1P53675 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 AP001005.3-201ENST00000622049 129 ntBASIC3.41□□□□□ -1.86
CLTCL1P53675 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.4□□□□□ -1.86
CLTCL1P53675 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLTCL1P53675 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.4□□□□□ -1.87
CLTCL1P53675 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLTCL1P53675 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.4□□□□□ -1.87
CLTCL1P53675 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.4□□□□□ -1.87
CLTCL1P53675 BX664608.1-201ENST00000610519 487 ntBASIC3.4□□□□□ -1.87
CLTCL1P53675 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.4□□□□□ -1.87
CLTCL1P53675 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLTCL1P53675 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLTCL1P53675 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CLTCL1P53675 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLTCL1P53675 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLTCL1P53675 SNORA25.6-201ENST00000364121 118 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 RNU1-73P-201ENST00000383971 164 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 AL353705.4-201ENST00000449661 238 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.39□□□□□ -1.87
CLTCL1P53675 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.39□□□□□ -1.87
CLTCL1P53675 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLTCL1P53675 AP000867.2-201ENST00000532468 320 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.39□□□□□ -1.87
CLTCL1P53675 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.39□□□□□ -1.87
CLTCL1P53675 NF1P10-201ENST00000613227 742 ntBASIC3.39□□□□□ -1.87
CLTCL1P53675 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
CLTCL1P53675 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLTCL1P53675 RN7SL499P-201ENST00000481141 276 ntBASIC3.38□□□□□ -1.87
CLTCL1P53675 RPL9P6-201ENST00000492764 598 ntBASIC3.38□□□□□ -1.87
CLTCL1P53675 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLTCL1P53675 AC067747.1-201ENST00000608026 250 ntBASIC3.38□□□□□ -1.87
CLTCL1P53675 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLTCL1P53675 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLTCL1P53675 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLTCL1P53675 AC007064.1-201ENST00000412238 351 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 SETP10-201ENST00000424368 814 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLTCL1P53675 RPL9P32-201ENST00000464118 620 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC108210.2-201ENST00000503681 201 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.37□□□□□ -1.87
CLTCL1P53675 ELOCP31-201ENST00000540463 467 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.37□□□□□ -1.87
CLTCL1P53675 YWHAZP1-201ENST00000556286 722 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC025754.2-201ENST00000606491 432 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.37□□□□□ -1.87
CLTCL1P53675 MIR6715B-201ENST00000637172 77 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLTCL1P53675 AC097714.1-201ENST00000511272 1647 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 SNORA41-201ENST00000384675 132 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLTCL1P53675 CYCSP45-201ENST00000402289 315 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 ATP5F1P6-201ENST00000402768 767 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 RNA5SP344-201ENST00000411081 104 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 RNA5SP247-201ENST00000411181 105 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms