Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RPL7P46-201ENST00000425129 740 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC236972.1-201ENST00000433225 199 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7.38□□□□□ -1.23
PRIM1P49642 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.38□□□□□ -1.23
PRIM1P49642 AL772161.1-201ENST00000439130 476 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AL162739.1-201ENST00000450606 307 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 HMGB3P21-201ENST00000452483 547 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC112492.4-201ENST00000456549 352 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC245028.2-201ENST00000458673 253 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 RPS27AP18-201ENST00000515536 459 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 RN7SKP66-201ENST00000516681 231 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.38□□□□□ -1.23
PRIM1P49642 AC131281.1-201ENST00000522984 164 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC7.38□□□□□ -1.23
PRIM1P49642 AC106782.4-201ENST00000568264 210 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 MIR4646-201ENST00000580775 63 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AC110743.1-201ENST00000584870 478 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AL118522.2-201ENST00000616045 615 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AP001784.1-201ENST00000624107 428 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 AL606534.2-204ENST00000635008 178 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 AP004607.3-201ENST00000530354 3915 ntBASIC7.38□□□□□ -1.23
PRIM1P49642 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PRIM1P49642 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PRIM1P49642 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.37□□□□□ -1.23
PRIM1P49642 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 RNA5SP335-201ENST00000363817 110 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 Y_RNA.276-201ENST00000364732 109 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 Y_RNA.555-201ENST00000384673 110 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AL583834.1-201ENST00000406943 343 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 MIR1252-201ENST00000408861 65 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 Y_RNA.594-201ENST00000410373 140 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC234781.4-201ENST00000419384 244 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC092651.1-201ENST00000426110 312 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 PPIAP13-201ENST00000434706 478 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AC073910.1-201ENST00000445047 438 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 RPS23P3-201ENST00000470993 430 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 BX284632.1-201ENST00000478218 541 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.37□□□□□ -1.23
PRIM1P49642 SLC25A15P5-201ENST00000508033 253 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.37□□□□□ -1.23
PRIM1P49642 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.37□□□□□ -1.23
PRIM1P49642 OR5D17P-201ENST00000531492 978 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AP003385.6-201ENST00000531603 374 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 MIR5583-1-201ENST00000580941 59 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC7.37□□□□□ -1.23
PRIM1P49642 AC012616.1-201ENST00000600294 197 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 CR392039.4-201ENST00000624968 501 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AL732372.2-225ENST00000642124 456 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
PRIM1P49642 MTCO1P24-201ENST00000515438 1558 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 AL022323.4-201ENST00000623980 13120 ntBASIC7.37□□□□□ -1.23
PRIM1P49642 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
PRIM1P49642 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.37□□□□□ -1.23
PRIM1P49642 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
PRIM1P49642 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.36□□□□□ -1.23
PRIM1P49642 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.36□□□□□ -1.23
PRIM1P49642 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.36□□□□□ -1.23
PRIM1P49642 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.36□□□□□ -1.23
PRIM1P49642 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRIM1P49642 GNG5P2-201ENST00000372054 207 ntBASIC7.36□□□□□ -1.23
PRIM1P49642 Y_RNA.461-201ENST00000384263 103 ntBASIC7.36□□□□□ -1.23
PRIM1P49642 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PRIM1P49642 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.36□□□□□ -1.23
PRIM1P49642 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms