Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AP000619.3-201ENST00000535634 1127 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC6A12P48065 RFPL1S-203ENST00000539579 330 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC6A12P48065 AC022916.3-201ENST00000592961 742 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 AC010620.1-201ENST00000601088 1102 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 Z99497.2-201ENST00000603634 310 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 AC025588.3-201ENST00000604182 274 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 AL354976.1-201ENST00000613843 387 ntBASIC3.67□□□□□ -1.82
SLC6A12P48065 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A12P48065 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A12P48065 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SLC6A12P48065 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A12P48065 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A12P48065 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC6A12P48065 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC6A12P48065 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A12P48065 GABPAP-201ENST00000419271 1356 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC6A12P48065 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 SNORD116-1-201ENST00000384335 95 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 Y_RNA.493-201ENST00000384422 102 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC6A12P48065 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC6A12P48065 SOD2P1-201ENST00000396543 562 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RNA5SP56-201ENST00000410277 118 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RNU2-37P-201ENST00000410695 177 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC006960.1-201ENST00000419980 153 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AL139421.1-201ENST00000423010 169 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AL513174.1-201ENST00000423182 629 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A12P48065 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A12P48065 ATP5F1P1-201ENST00000433775 569 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RPL21P112-201ENST00000434403 463 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 MTND3P1-201ENST00000441336 220 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC006480.1-201ENST00000449887 378 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AL133477.1-201ENST00000457472 514 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 snoU13.3-201ENST00000459441 104 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC022034.3-201ENST00000471393 478 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC007537.2-201ENST00000472093 511 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 VPS26AP1-201ENST00000483197 979 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RPL31P13-201ENST00000484151 370 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 VN1R105P-201ENST00000486595 910 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RN7SL323P-201ENST00000494712 295 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC079395.1-201ENST00000510981 262 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC6A12P48065 RNU6-885P-201ENST00000516607 104 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC090281.1-201ENST00000523019 276 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 ARL2BPP5-201ENST00000523141 481 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 AP003385.6-201ENST00000531603 374 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC005832.3-201ENST00000537929 631 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC6A12P48065 HIGD1AP17-201ENST00000554576 276 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC106785.1-201ENST00000565935 262 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC053481.4-201ENST00000583164 216 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 PIGPP4-201ENST00000584447 307 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AL158042.1-201ENST00000605338 460 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC072039.2-201ENST00000608883 439 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 MIR6875-201ENST00000617506 72 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 RMST_9.1-201ENST00000619945 193 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC6A12P48065 AC068137.4-201ENST00000638485 296 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 AC008725.1-201ENST00000605123 2263 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 SGO1P2-201ENST00000429458 1589 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 FAM35DP-201ENST00000323387 2712 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 DBF4P1-201ENST00000412976 1892 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 ZNF542P-204ENST00000482727 1305 ntBASIC3.66□□□□□ -1.82
SLC6A12P48065 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC6A12P48065 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SLC6A12P48065 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.65□□□□□ -1.82
SLC6A12P48065 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SLC6A12P48065 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.65□□□□□ -1.82
SLC6A12P48065 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.65□□□□□ -1.82
SLC6A12P48065 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC6A12P48065 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC6A12P48065 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
SLC6A12P48065 RNVU1-3-201ENST00000364313 161 ntBASIC3.65□□□□□ -1.83
SLC6A12P48065 SNORA7.2-201ENST00000364446 145 ntBASIC3.65□□□□□ -1.83
SLC6A12P48065 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
SLC6A12P48065 MIR607-201ENST00000385241 96 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms