Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 DSTNP2-201ENST00000504533 515 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC139783.2-201ENST00000504847 1145 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 RN7SKP277-201ENST00000516895 283 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN9P43378 AL121766.1-201ENST00000547436 487 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 GNRHR2P1-201ENST00000555315 631 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 ACTR3BP3-201ENST00000565577 979 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 OR2AS2P-201ENST00000606902 342 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN9P43378 AC128687.2-201ENST00000609657 566 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC106028.5-201ENST00000610332 395 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC023043.4-201ENST00000612081 449 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AC025588.4-201ENST00000615802 908 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN9P43378 Z69908.1-201ENST00000622603 247 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 CYP3A51P-201ENST00000633513 256 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN9P43378 ZNF833P-201ENST00000424938 1494 ntBASIC4.18□□□□□ -1.74
PTPN9P43378 ZNF962P-201ENST00000443465 3140 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 RPL23AP57-201ENST00000332361 466 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 RNU6-433P-201ENST00000363216 104 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 RNU6-723P-201ENST00000383973 107 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 MIR1183-201ENST00000408856 89 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 RNA5SP317-201ENST00000410176 116 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 RNA5SP311-201ENST00000411290 116 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 AL512649.1-201ENST00000428997 581 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 RPS11P1-201ENST00000451072 473 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN9P43378 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 RNA5SP315-201ENST00000516340 116 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 RNA5SP312-201ENST00000517068 116 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 PTP4A1P6-201ENST00000531034 478 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN9P43378 PARP1P2-201ENST00000556806 195 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.17□□□□□ -1.74
PTPN9P43378 AL133457.1-201ENST00000564251 987 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC136624.4-201ENST00000573044 370 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 LARP7P2-201ENST00000575306 125 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC040904.1-201ENST00000590850 223 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 AC092354.1-201ENST00000606057 376 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AL513477.2-201ENST00000607858 568 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC011939.3-201ENST00000613686 466 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC233309.1-201ENST00000619522 751 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 AC009318.4-201ENST00000620496 486 ntBASIC4.17□□□□□ -1.74
PTPN9P43378 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
PTPN9P43378 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.17□□□□□ -1.74
PTPN9P43378 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTPN9P43378 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 MTCO1P23-201ENST00000415223 1526 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 AP002907.1-201ENST00000606361 1430 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PTPN9P43378 RNA5SP399-201ENST00000364003 117 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 Y_RNA.201-201ENST00000364052 96 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 SNORA70.2-201ENST00000364506 135 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PTPN9P43378 AC016769.3-201ENST00000396562 315 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.16□□□□□ -1.74
PTPN9P43378 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms