Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HSPA8P1-201ENST00000425843 1833 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 NCAPGP1-201ENST00000505112 1814 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXD13P35453 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXD13P35453 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HOXD13P35453 RNU1-18P-201ENST00000363062 164 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 AL591419.1-201ENST00000427423 339 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXD13P35453 Z95327.1-201ENST00000446082 482 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 TRGVB-201ENST00000453257 471 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AL133162.1-201ENST00000463228 453 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 RPL21P104-201ENST00000464143 478 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC010285.1-201ENST00000470580 392 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 RPL7P18-201ENST00000478965 734 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC092451.1-201ENST00000480211 153 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AL139099.1-201ENST00000497398 403 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC010587.2-201ENST00000511727 448 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC026402.1-201ENST00000513642 170 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 RNU6-1073P-201ENST00000517182 106 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD13P35453 AGGF1P5-201ENST00000567900 919 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 MIR5685-201ENST00000579080 79 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.1□□□□□ -1.75
HOXD13P35453 AC091057.2-201ENST00000602594 792 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC025588.4-201ENST00000615802 908 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AL731566.2-201ENST00000618971 317 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC006386.1-201ENST00000619436 415 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC103858.2-201ENST00000621471 543 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 AC048347.1-201ENST00000624621 427 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.1□□□□□ -1.75
HOXD13P35453 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 AL049780.3-201ENST00000624612 1583 ntBASIC4.1□□□□□ -1.75
HOXD13P35453 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXD13P35453 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
HOXD13P35453 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD13P35453 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD13P35453 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD13P35453 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD13P35453 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD13P35453 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD13P35453 RNU6-600P-201ENST00000362524 99 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 MIR513B-201ENST00000385136 84 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXD13P35453 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 SNORA57.1-201ENST00000391227 145 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 AL138878.1-201ENST00000405131 347 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 HSPE1P8-201ENST00000406997 288 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 MIR1284-201ENST00000408337 120 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 RNU2-37P-201ENST00000410695 177 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 MTCO2P5-201ENST00000422621 426 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 Z73417.1-201ENST00000447373 778 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 ARPC3P5-201ENST00000448802 534 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 MTND2P19-201ENST00000449129 1012 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 RPS24P6-201ENST00000452670 400 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AL445669.2-201ENST00000454425 421 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 AC097493.1-201ENST00000463958 372 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 TMEM251P1-201ENST00000503717 318 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 RNA5SP164-201ENST00000516533 110 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXD13P35453 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXD13P35453 AC006960.3-201ENST00000561845 705 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 MIR4760-201ENST00000585040 80 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 VN1R82P-201ENST00000601481 356 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 AC245297.2-201ENST00000610119 565 ntBASIC4.09□□□□□ -1.75
HOXD13P35453 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXD13P35453 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXD13P35453 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXD13P35453 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms