Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CIITAP33076 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.42□□□□□ -1.7
CIITAP33076 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CIITAP33076 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
CIITAP33076 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 RNU4-21P-201ENST00000362802 126 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RNU6-492P-201ENST00000363035 104 ntBASIC4.41□□□□□ -1.7
CIITAP33076 CYCSP45-201ENST00000402289 315 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AL450338.1-201ENST00000407987 512 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RNA5SP104-201ENST00000410989 118 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 AC092634.6-201ENST00000418558 192 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AL049610.1-201ENST00000423374 372 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RPS6P12-201ENST00000432491 726 ntBASIC4.41□□□□□ -1.7
CIITAP33076 KCTD10P1-201ENST00000434203 625 ntBASIC4.41□□□□□ -1.7
CIITAP33076 B3GNT2P1-201ENST00000434960 952 ntBASIC4.41□□□□□ -1.7
CIITAP33076 Z74696.2-201ENST00000436514 498 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RPS29P7-201ENST00000439662 171 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RANP8-201ENST00000444720 713 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 PPIAP3-201ENST00000450588 505 ntBASIC4.41□□□□□ -1.7
CIITAP33076 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 PPIAP15-201ENST00000479662 484 ntBASIC4.41□□□□□ -1.7
CIITAP33076 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.41□□□□□ -1.7
CIITAP33076 SNX5P1-201ENST00000505757 1041 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.41□□□□□ -1.7
CIITAP33076 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.41□□□□□ -1.7
CIITAP33076 SNORA48.10-201ENST00000516965 160 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RN7SKP234-201ENST00000517173 224 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.41□□□□□ -1.7
CIITAP33076 AC060788.1-201ENST00000521318 469 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AP001207.1-201ENST00000524051 481 ntBASIC4.41□□□□□ -1.7
CIITAP33076 OR5AK1P-201ENST00000524837 922 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.41□□□□□ -1.7
CIITAP33076 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
CIITAP33076 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.41□□□□□ -1.7
CIITAP33076 CYCSP30-201ENST00000546447 172 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC007954.1-201ENST00000554198 494 ntBASIC4.41□□□□□ -1.7
CIITAP33076 HSPE1P5-201ENST00000561489 272 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.41□□□□□ -1.7
CIITAP33076 AC119751.7-201ENST00000600494 245 ntBASIC4.41□□□□□ -1.7
CIITAP33076 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC006270.3-201ENST00000605967 1036 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC024560.3-201ENST00000608482 349 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AC103591.3-201ENST00000608684 209 ntBASIC4.41□□□□□ -1.7
CIITAP33076 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 AL031667.3-201ENST00000620124 655 ntBASIC4.41□□□□□ -1.7
CIITAP33076 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CIITAP33076 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.41□□□□□ -1.7
CIITAP33076 AC107982.1-201ENST00000507171 1300 ntBASIC4.41□□□□□ -1.7
CIITAP33076 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 AL133412.1-201ENST00000380194 2992 ntBASIC4.41□□□□□ -1.7
CIITAP33076 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CIITAP33076 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CIITAP33076 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.4□□□□□ -1.7
CIITAP33076 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.4□□□□□ -1.7
CIITAP33076 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CIITAP33076 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.4□□□□□ -1.71
CIITAP33076 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CIITAP33076 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 AL672167.1-206ENST00000356293 943 ntBASIC4.4□□□□□ -1.71
CIITAP33076 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 RNA5SP97-201ENST00000365006 84 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RNU6-1293P-201ENST00000384077 107 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RPL32P23-201ENST00000397237 405 ntBASIC4.4□□□□□ -1.71
CIITAP33076 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.71
CIITAP33076 TPMTP3-201ENST00000411928 735 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RPL7P8-201ENST00000411964 730 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RPS15AP40-201ENST00000419621 391 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC006366.1-201ENST00000422002 759 ntBASIC4.4□□□□□ -1.71
CIITAP33076 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.4□□□□□ -1.71
CIITAP33076 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 RPS17P13-201ENST00000448974 407 ntBASIC4.4□□□□□ -1.71
CIITAP33076 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.4□□□□□ -1.71
CIITAP33076 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.4□□□□□ -1.71
CIITAP33076 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
CIITAP33076 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 AC146507.1-201ENST00000468335 354 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC007537.2-201ENST00000472093 511 ntBASIC4.4□□□□□ -1.71
CIITAP33076 RN7SL132P-201ENST00000478131 296 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC109486.1-201ENST00000486833 374 ntBASIC4.4□□□□□ -1.71
CIITAP33076 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.4□□□□□ -1.71
CIITAP33076 AC025445.1-201ENST00000502728 300 ntBASIC4.4□□□□□ -1.71
CIITAP33076 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CIITAP33076 AC010424.1-201ENST00000506336 297 ntBASIC4.4□□□□□ -1.71
CIITAP33076 VWA8P1-201ENST00000510889 176 ntBASIC4.4□□□□□ -1.71
CIITAP33076 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.4□□□□□ -1.71
CIITAP33076 MTND3P5-201ENST00000512798 333 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC026402.1-201ENST00000513642 170 ntBASIC4.4□□□□□ -1.71
CIITAP33076 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC106038.2-201ENST00000520706 568 ntBASIC4.4□□□□□ -1.71
CIITAP33076 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms