Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.8□□□□□ -1.8
CLIP1P30622 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.8□□□□□ -1.8
CLIP1P30622 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP1P30622 KLHL2P1-201ENST00000508691 521 ntBASIC3.8□□□□□ -1.8
CLIP1P30622 AC026436.1-201ENST00000510537 270 ntBASIC3.8□□□□□ -1.8
CLIP1P30622 EEF1A1P37-201ENST00000522748 715 ntBASIC3.8□□□□□ -1.8
CLIP1P30622 MIR4506-201ENST00000584693 77 ntBASIC3.8□□□□□ -1.8
CLIP1P30622 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.8□□□□□ -1.8
CLIP1P30622 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
CLIP1P30622 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLIP1P30622 FAT1P1-201ENST00000406588 507 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 RN7SKP123-201ENST00000410732 291 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 RNA5SP344-201ENST00000411081 104 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 RPL7P53-201ENST00000421245 739 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 RPL36AP6-201ENST00000435770 321 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 HMGB3P12-201ENST00000438745 556 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 RPS12P2-201ENST00000439728 269 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 AL353705.4-201ENST00000449661 238 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP1P30622 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.79□□□□□ -1.8
CLIP1P30622 AC034244.2-201ENST00000514668 858 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.79□□□□□ -1.8
CLIP1P30622 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP1P30622 AC021269.2-201ENST00000532318 330 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.79□□□□□ -1.8
CLIP1P30622 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLIP1P30622 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLIP1P30622 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLIP1P30622 AL161431.1-201ENST00000618966 4205 ntBASIC3.79□□□□□ -1.8
CLIP1P30622 SNORA41-201ENST00000384675 132 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 RN7SKP140-201ENST00000411196 284 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP1P30622 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP1P30622 FAM103A2P-201ENST00000444122 354 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 RPS27P27-201ENST00000498779 255 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 ACTR6P1-201ENST00000514311 1104 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.78□□□□□ -1.8
CLIP1P30622 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP1P30622 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLIP1P30622 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.78□□□□□ -1.8
CLIP1P30622 BX276092.3-201ENST00000424182 230 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 AC018634.1-201ENST00000437554 401 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 RPL23AP23-201ENST00000452590 471 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 AP000926.1-201ENST00000479573 241 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP1P30622 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLIP1P30622 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.78□□□□□ -1.8
CLIP1P30622 LRRC77P-213ENST00000637727 880 ntBASIC3.78□□□□□ -1.8
CLIP1P30622 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP1P30622 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP1P30622 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.77□□□□□ -1.81
CLIP1P30622 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP1P30622 RNU6-328P-201ENST00000390887 106 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLIP1P30622 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.77□□□□□ -1.81
CLIP1P30622 AC003685.2-201ENST00000422795 395 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 ARF4P2-201ENST00000430209 526 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.77□□□□□ -1.81
CLIP1P30622 HMGN1P5-201ENST00000448591 263 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.77□□□□□ -1.81
CLIP1P30622 RNA5SP385-201ENST00000515947 110 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 AC009163.5-201ENST00000575421 637 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 AL356274.1-201ENST00000617064 410 ntBASIC3.77□□□□□ -1.81
CLIP1P30622 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLIP1P30622 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLIP1P30622 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP1P30622 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CLIP1P30622 AC005189.1-201ENST00000431286 310 ntBASIC3.76□□□□□ -1.81
CLIP1P30622 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.76□□□□□ -1.81
CLIP1P30622 AL049830.2-201ENST00000480072 201 ntBASIC3.76□□□□□ -1.81
CLIP1P30622 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.76□□□□□ -1.81
CLIP1P30622 AL160237.3-201ENST00000604114 1013 ntBASIC3.76□□□□□ -1.81
CLIP1P30622 AC009313.2-201ENST00000417893 1941 ntBASIC3.76□□□□□ -1.81
CLIP1P30622 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLIP1P30622 CYCSP45-201ENST00000402289 315 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 OR51A3P-201ENST00000413596 924 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.75□□□□□ -1.81
CLIP1P30622 ZYG11AP1-201ENST00000430329 837 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 Z99127.2-201ENST00000441426 334 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 RNA5SP281-201ENST00000516504 135 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLIP1P30622 MTCO3P13-201ENST00000577757 781 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLIP1P30622 MTND5P6-201ENST00000422338 1798 ntBASIC3.75□□□□□ -1.81
CLIP1P30622 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLIP1P30622 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP1P30622 SNORD114-30-201ENST00000364448 72 ntBASIC3.74□□□□□ -1.81
CLIP1P30622 ATG3P1-201ENST00000419507 911 ntBASIC3.74□□□□□ -1.81
CLIP1P30622 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP1P30622 snoU13.23-201ENST00000458863 104 ntBASIC3.74□□□□□ -1.81
CLIP1P30622 AC026412.2-201ENST00000512270 1075 ntBASIC3.74□□□□□ -1.81
CLIP1P30622 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.74□□□□□ -1.81
CLIP1P30622 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP1P30622 AL442163.2-201ENST00000553912 710 ntBASIC3.74□□□□□ -1.81
CLIP1P30622 MIR5007-201ENST00000583098 95 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms