Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC007546.1-201ENST00000619452 559 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 AC002550.2-201ENST00000621246 394 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 AF246928.1-201ENST00000623768 87 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.99□□□□□ -1.77
ABCD3P28288 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ABCD3P28288 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCD3P28288 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.99□□□□□ -1.77
ABCD3P28288 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
ABCD3P28288 AL445523.1-201ENST00000451184 1362 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCD3P28288 AL158163.1-201ENST00000603915 1649 ntBASIC3.99□□□□□ -1.77
ABCD3P28288 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
ABCD3P28288 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCD3P28288 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ABCD3P28288 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCD3P28288 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 AC126755.2-208ENST00000327792 462 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC138969.1-213ENST00000331436 462 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 RNU6-600P-201ENST00000362524 99 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 RNU6-660P-201ENST00000364566 109 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 RNU6-1074P-201ENST00000383995 104 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL583835.1-201ENST00000399570 407 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL049693.1-201ENST00000402760 611 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL031577.2-201ENST00000404133 280 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 CCDC58P2-201ENST00000417131 366 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 Z99497.1-201ENST00000421282 135 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL512649.1-201ENST00000428997 581 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC108734.1-201ENST00000439549 399 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL512326.1-201ENST00000443050 721 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 CDC27P1-201ENST00000445384 715 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AP000542.1-201ENST00000448473 371 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.98□□□□□ -1.77
ABCD3P28288 SNORD121B-201ENST00000458838 81 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 RPS26P28-201ENST00000470806 348 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC021382.1-201ENST00000483523 359 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 CEACAMP10-202ENST00000495431 496 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 AC103783.1-201ENST00000520506 373 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC069240.1-201ENST00000548774 375 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC084824.1-201ENST00000550917 1005 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 PCMTD1P2-201ENST00000565017 355 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC135628.1-201ENST00000568867 534 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL121834.1-201ENST00000572284 509 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC007687.1-201ENST00000602704 304 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 MTCYBP22-201ENST00000603788 447 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC006023.2-201ENST00000609916 167 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AC106028.5-201ENST00000610332 395 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 MIR378J-201ENST00000611988 109 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCD3P28288 AC015967.1-201ENST00000619893 476 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 AL360181.4-201ENST00000621752 134 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 AC011266.1-201ENST00000624119 3569 ntBASIC3.98□□□□□ -1.77
ABCD3P28288 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
ABCD3P28288 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 RNA5SP52-201ENST00000362448 134 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC007066.1-201ENST00000392902 381 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 AL603766.1-201ENST00000407763 664 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 PGBD4P8-201ENST00000412993 562 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 AL157831.1-201ENST00000426134 473 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 AL445567.1-201ENST00000439121 144 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL353748.1-201ENST00000440753 474 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 RPL21P104-201ENST00000464143 478 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 BET1P1-201ENST00000482276 359 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 RPL35P6-201ENST00000490024 372 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC096751.1-202ENST00000502691 1067 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC021146.1-201ENST00000511202 716 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC017037.2-201ENST00000513850 890 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms