Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 U8.18-201ENST00000459285 133 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC096751.1-202ENST00000502691 1067 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AF279873.1-201ENST00000523393 313 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC087883.1-201ENST00000551882 391 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC093519.1-201ENST00000566109 298 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AL121834.1-201ENST00000572284 509 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC090312.1-201ENST00000580637 348 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC012065.4-201ENST00000602445 679 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC091488.1-201ENST00000604239 660 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 NDUFA8P1-201ENST00000605525 367 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC107214.2-201ENST00000608204 634 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC013476.2-201ENST00000614456 459 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC120349.2-201ENST00000625002 298 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 DDX18P3-201ENST00000404856 2007 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 AC021242.1-201ENST00000507315 2035 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 MTCO1P23-201ENST00000415223 1526 ntBASIC5.07□□□□□ -1.6
SNRPA1P09661 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SNRPA1P09661 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNRPA1P09661 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.06□□□□□ -1.6
SNRPA1P09661 AC012020.1-201ENST00000624541 1728 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.06□□□□□ -1.6
SNRPA1P09661 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 Y_RNA.25-201ENST00000362528 102 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RNU6-433P-201ENST00000363216 104 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RNU4-91P-201ENST00000364778 135 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RNA5SP97-201ENST00000365006 84 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RNU6-1151P-201ENST00000384684 107 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.06□□□□□ -1.6
SNRPA1P09661 MTND1P23-201ENST00000416931 372 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 MTCYBP38-201ENST00000417160 1123 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.06□□□□□ -1.6
SNRPA1P09661 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.06□□□□□ -1.6
SNRPA1P09661 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.06□□□□□ -1.6
SNRPA1P09661 NPM1P34-201ENST00000428821 893 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.06□□□□□ -1.6
SNRPA1P09661 B3GNT2P1-201ENST00000434960 952 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 UBE2FP3-201ENST00000436366 524 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 ELOCP10-201ENST00000440624 327 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SNRPA1P09661 AL592447.1-201ENST00000447592 540 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 SSXP1-201ENST00000453640 473 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RPL18AP17-201ENST00000455326 198 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 RPL7L1P8-201ENST00000469911 741 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 MTCYBP17-201ENST00000503579 789 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 MTND2P33-201ENST00000506452 1031 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 FABP5P5-201ENST00000515537 406 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AC087369.1-201ENST00000520775 996 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.06□□□□□ -1.6
SNRPA1P09661 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.06□□□□□ -1.6
SNRPA1P09661 AC015871.2-201ENST00000603605 948 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 ELOCP34-201ENST00000604436 327 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AC104662.1-201ENST00000604448 511 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AL354760.1-201ENST00000608357 643 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AC026368.1-201ENST00000614934 690 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 AL357080.1-201ENST00000617394 239 ntBASIC5.06□□□□□ -1.6
SNRPA1P09661 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.06□□□□□ -1.6
SNRPA1P09661 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.06□□□□□ -1.6
SNRPA1P09661 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SNRPA1P09661 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNRPA1P09661 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNRPA1P09661 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNRPA1P09661 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNRPA1P09661 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNRPA1P09661 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNRPA1P09661 AL512646.1-201ENST00000269395 1077 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 RNU6-501P-201ENST00000364072 100 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 U1.1-201ENST00000384101 164 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 MIR449B-201ENST00000384995 97 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 MIR1251-201ENST00000408552 70 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.05□□□□□ -1.6
SNRPA1P09661 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC234782.4-201ENST00000417646 1048 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC010975.2-201ENST00000427781 588 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AL365184.2-201ENST00000431139 435 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 AC083863.1-201ENST00000438811 231 ntBASIC5.05□□□□□ -1.6
SNRPA1P09661 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms