Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN9O95484 RNU6-115P-201ENST00000364310 107 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 RNU6-468P-201ENST00000384003 109 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN9O95484 AP000567.1-201ENST00000406413 156 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AL023807.1-201ENST00000407932 359 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN9O95484 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN9O95484 FNDC3CP-201ENST00000420795 1155 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 RPS6P14-201ENST00000425165 719 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN9O95484 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 AL512637.2-201ENST00000431287 1256 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 HMGN2P31-201ENST00000432430 273 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AC004022.1-201ENST00000447766 1066 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN9O95484 RPL21P18-201ENST00000469899 480 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 RPL7P49-201ENST00000471402 708 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN9O95484 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN9O95484 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN9O95484 AC026403.1-201ENST00000518938 295 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN9O95484 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN9O95484 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.22□□□□□ -1.89
CLDN9O95484 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 DPRXP5-201ENST00000604662 539 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AC069200.1-201ENST00000609511 323 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN9O95484 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLDN9O95484 AC138915.3-201ENST00000562908 1389 ntBASIC3.22□□□□□ -1.89
CLDN9O95484 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN9O95484 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN9O95484 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CLDN9O95484 AC091152.2-201ENST00000591628 2569 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN9O95484 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN9O95484 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLDN9O95484 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN9O95484 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 RNA5SP258-201ENST00000362750 119 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLDN9O95484 RPL31P1-201ENST00000398116 372 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 TMSB4XP8-201ENST00000402089 135 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AL139098.1-201ENST00000407291 389 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 RPS7P13-201ENST00000413955 498 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 TMSB4XP6-201ENST00000415187 135 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 SFR1P2-201ENST00000421841 730 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 TMSB4XP1-201ENST00000424567 135 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 RPS7P2-201ENST00000435134 607 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 CST9LP2-201ENST00000437612 320 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN9O95484 TXNP1-201ENST00000441872 371 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 SEPT14P24-201ENST00000447236 180 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 Z99127.3-201ENST00000448158 395 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 NPM1P13-201ENST00000452663 865 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 RPS24P6-201ENST00000452670 400 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC010468.1-201ENST00000461022 817 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 RPL21P104-201ENST00000464143 478 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN9O95484 RN7SKP157-201ENST00000516174 282 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 IGKV2D-19-201ENST00000523346 262 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AP000790.1-201ENST00000528891 737 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.21□□□□□ -1.9
CLDN9O95484 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.21□□□□□ -1.9
CLDN9O95484 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.21□□□□□ -1.9
CLDN9O95484 GAS5-AS1-201ENST00000602767 694 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC103881.1-201ENST00000603476 538 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC012468.1-201ENST00000604888 430 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AL450489.1-201ENST00000612071 468 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 VN1R74P-201ENST00000613259 503 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.21□□□□□ -1.9
CLDN9O95484 AC073968.1-201ENST00000618594 637 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms