Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL445567.2-201ENST00000618935 498 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AL356266.1-201ENST00000623311 483 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC091931.1-201ENST00000623488 728 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 AC026422.1-201ENST00000623961 452 ntBASIC3.82□□□□□ -1.8
NKX2-2O95096 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
NKX2-2O95096 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-2O95096 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NKX2-2O95096 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-2O95096 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-2O95096 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 CR383658.2-201ENST00000547576 1525 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 MARK2P15-201ENST00000432204 2186 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 RNU6-335P-201ENST00000364563 113 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 RNU6-744P-201ENST00000365557 107 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 RNU6-1316P-201ENST00000384242 108 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NKX2-2O95096 TPMTP3-201ENST00000411928 735 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC092447.6-201ENST00000414578 210 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 RPL23AP38-201ENST00000423801 469 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AL831737.1-201ENST00000441288 271 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AP000542.1-201ENST00000448473 371 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC021678.1-201ENST00000505195 936 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC034159.1-201ENST00000513885 583 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 PCMTD1P2-201ENST00000565017 355 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-2O95096 RPL23AP87-202ENST00000573039 466 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC012417.1-201ENST00000582307 1039 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 AC104662.1-201ENST00000604448 511 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC128687.1-201ENST00000605304 619 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC105129.3-201ENST00000605455 485 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC011816.2-201ENST00000607089 556 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC107214.2-201ENST00000608204 634 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC018755.4-201ENST00000619715 454 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AL023881.1-201ENST00000621088 301 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 AC008443.7-201ENST00000622195 246 ntBASIC3.81□□□□□ -1.8
NKX2-2O95096 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-2O95096 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-2O95096 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NKX2-2O95096 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 OR11H5P-202ENST00000641612 1325 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-2O95096 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NKX2-2O95096 RNU6-359P-201ENST00000365466 108 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 MIR93-201ENST00000385024 80 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 SNORA11B-201ENST00000408175 129 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 RNU6-712P-201ENST00000410558 100 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 RN7SKP177-201ENST00000410567 355 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 RN7SKP33-201ENST00000410942 340 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AL160275.2-201ENST00000412010 394 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 EI24P1-201ENST00000416584 867 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC092647.1-201ENST00000420654 287 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 MED14P1-201ENST00000430517 648 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AL358472.1-201ENST00000431295 329 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 LARP1BP3-201ENST00000437229 869 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-2O95096 ZNF114P1-201ENST00000453500 292 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 snoU13.8-201ENST00000458890 104 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 ST13P14-201ENST00000474095 734 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NKX2-2O95096 RN7SL604P-201ENST00000492589 296 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 RPL29P14-201ENST00000495837 428 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC025445.1-201ENST00000502728 300 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 AC006499.5-201ENST00000505037 514 ntBASIC3.8□□□□□ -1.8
NKX2-2O95096 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-2O95096 AC105313.1-201ENST00000509121 353 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms