Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.05□□□□□ -1.92
SHOX2O60902 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 RNU6-600P-201ENST00000362524 99 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.05□□□□□ -1.92
SHOX2O60902 SNORA5A-201ENST00000384111 134 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHOX2O60902 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHOX2O60902 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 PRRC2CP1-201ENST00000404428 159 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 BX323014.1-201ENST00000412876 237 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 MTND2P21-201ENST00000436242 1042 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 AC108734.1-201ENST00000439549 399 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.05□□□□□ -1.92
SHOX2O60902 RSL24D1P2-201ENST00000445584 366 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 NF1P3-201ENST00000457709 450 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AC017015.1-201ENST00000477387 286 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AP001025.2-201ENST00000490908 477 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.05□□□□□ -1.92
SHOX2O60902 AC098799.2-201ENST00000509466 868 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 HIGD1AP3-201ENST00000515857 278 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 Y_RNA.673-201ENST00000516306 88 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.05□□□□□ -1.92
SHOX2O60902 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.05□□□□□ -1.92
SHOX2O60902 SNRPGP15-201ENST00000600149 222 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AC018618.2-201ENST00000604770 446 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 HMGN2P28-201ENST00000606102 262 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 AC100793.4-201ENST00000613683 429 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 U73479.1-201ENST00000618062 168 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 AC010338.1-201ENST00000621823 717 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
SHOX2O60902 FRG1DP-201ENST00000635586 771 ntBASIC3.05□□□□□ -1.92
SHOX2O60902 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHOX2O60902 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
SHOX2O60902 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.04□□□□□ -1.92
SHOX2O60902 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOX2O60902 MTND4P34-201ENST00000572715 1371 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 RPL9P7-201ENST00000330965 580 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 RNU6-335P-201ENST00000364563 113 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHOX2O60902 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOX2O60902 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOX2O60902 RPL23AP47-201ENST00000408017 460 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 VTA1P1-201ENST00000414044 866 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 SYF2P2-201ENST00000417620 583 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 BX842559.1-201ENST00000419615 532 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 MTCYBP24-201ENST00000420387 1106 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 RPL21P110-201ENST00000433345 446 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AL590103.1-201ENST00000434488 307 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AC093392.2-201ENST00000450682 337 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOX2O60902 AC103975.1-201ENST00000482506 483 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 RPL7P38-201ENST00000488396 739 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 AC010306.1-201ENST00000523223 1117 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOX2O60902 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOX2O60902 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.04□□□□□ -1.92
SHOX2O60902 SERPINE4P-201ENST00000554978 281 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.04□□□□□ -1.92
SHOX2O60902 MIR3670-2-201ENST00000582974 65 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 MIR3670-1-201ENST00000584160 65 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 MIR3670-3-201ENST00000584855 65 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 MIR3922-201ENST00000585192 84 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 MIR3670-4-201ENST00000612260 65 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 AL590240.3-201ENST00000621416 943 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 U6.105-201ENST00000637379 88 ntBASIC3.04□□□□□ -1.92
SHOX2O60902 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHOX2O60902 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.04□□□□□ -1.92
SHOX2O60902 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOX2O60902 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOX2O60902 ZNF833P-201ENST00000424938 1494 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHOX2O60902 AP000705.1-201ENST00000454567 350 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 AC008571.1-201ENST00000467232 300 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.03□□□□□ -1.92
SHOX2O60902 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.03□□□□□ -1.92
SHOX2O60902 MTCO1P31-201ENST00000506355 492 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 MTCYBP41-201ENST00000528913 1123 ntBASIC3.03□□□□□ -1.92
SHOX2O60902 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHOX2O60902 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms