Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPL23AP23-201ENST00000452590 471 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 RPS4XP22-201ENST00000480755 780 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 RNU6-1028P-201ENST00000517164 93 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 HIGD1AP18-201ENST00000520730 278 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AC106734.1-201ENST00000568646 663 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AC005000.2-201ENST00000605468 310 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC018638.7-201ENST00000605836 1114 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AL353743.1-202ENST00000431724 1695 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA1FO60840 DDX43P2-201ENST00000604753 1354 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CACNA1FO60840 AL513185.3-201ENST00000433335 1300 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA1FO60840 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CACNA1FO60840 RNU6-1251P-201ENST00000364502 107 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 SNORD15B-201ENST00000384714 146 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AC009518.2-201ENST00000418056 731 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC245291.1-201ENST00000419501 328 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA1FO60840 MTND1P20-201ENST00000430341 950 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA1FO60840 USP9YP28-201ENST00000435142 589 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CACNA1FO60840 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA1FO60840 MTCO3P35-201ENST00000485582 781 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC093770.1-201ENST00000511559 571 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 Vault.1-201ENST00000516474 102 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA1FO60840 AC087373.1-201ENST00000524920 491 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC007336.1-201ENST00000576365 3828 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 AC022079.2-201ENST00000619739 566 ntBASIC3.89□□□□□ -1.79
CACNA1FO60840 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AL390862.1-201ENST00000635467 1469 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC019155.1-201ENST00000382242 574 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 RNU6-146P-201ENST00000384602 108 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 SNORA48.5-201ENST00000391143 135 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 UBA52P6-201ENST00000399822 382 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 HNRNPDP2-201ENST00000406475 478 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC105272.1-201ENST00000438604 198 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 OR6K5P-201ENST00000447050 945 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC239809.1-201ENST00000450470 217 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC117440.1-201ENST00000474107 571 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 RPL23AP44-201ENST00000482216 473 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.88□□□□□ -1.79
CACNA1FO60840 OR2A20P-203ENST00000498397 1268 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC091951.3-201ENST00000504093 246 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC034244.1-201ENST00000507687 207 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC092851.1-201ENST00000535964 478 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC125611.1-201ENST00000549563 229 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.88□□□□□ -1.79
CACNA1FO60840 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CACNA1FO60840 AC025588.2-201ENST00000604851 466 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC019131.2-201ENST00000609071 870 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC122108.2-201ENST00000611946 526 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 RMST_10.1-201ENST00000616309 154 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 AC079416.3-201ENST00000624479 549 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 OR5BR1P-201ENST00000524992 1330 ntBASIC3.88□□□□□ -1.79
CACNA1FO60840 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CACNA1FO60840 SNORA9.2-201ENST00000365361 133 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 SNORD65-201ENST00000391079 73 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 RPS12P5-201ENST00000423449 371 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AL353597.2-202ENST00000434901 373 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 MTND6P18-201ENST00000439477 513 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 ELOCP10-201ENST00000440624 327 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 KATNBL1P3-201ENST00000443475 909 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1FO60840 HMGB3P6-201ENST00000444896 598 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1FO60840 EXTL2P1-201ENST00000446218 416 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 MTND1P29-201ENST00000448112 647 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 ZNF886P-201ENST00000450781 723 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms