Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RBMY1KP-201ENST00000423480 476 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 VN1R108P-201ENST00000431580 830 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 MTCO2P16-201ENST00000436962 677 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 MUPP-201ENST00000438111 566 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNND1O60716 PAXBP1P1-201ENST00000449315 447 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC005297.2-201ENST00000450430 606 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC116337.2-201ENST00000477662 156 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 OR5H5P-201ENST00000503164 928 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 BNIP3P41-201ENST00000503774 571 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 MTCO3P44-201ENST00000510977 541 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNND1O60716 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 AL139174.1-201ENST00000531489 886 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNND1O60716 GTF2IP22-201ENST00000554443 182 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNND1O60716 HSPE1P5-201ENST00000561489 272 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 AL355812.1-201ENST00000603215 216 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AL031775.1-201ENST00000607014 887 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC012360.2-201ENST00000609349 391 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AL158063.1-201ENST00000615349 536 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 MIR6075-201ENST00000620782 95 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 AC019278.1-201ENST00000623516 479 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNND1O60716 AC116667.1-201ENST00000604855 2072 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 NUP58P1-201ENST00000502546 1738 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 MTND4P16-201ENST00000466108 1367 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CTNND1O60716 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNND1O60716 AC074029.4-201ENST00000624796 1859 ntBASIC4.88□□□□□ -1.63
CTNND1O60716 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CTNND1O60716 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTNND1O60716 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTNND1O60716 RNU4-21P-201ENST00000362802 126 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 MT-TC-201ENST00000387405 66 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.87□□□□□ -1.63
CTNND1O60716 PSMA6P3-201ENST00000428242 164 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.87□□□□□ -1.63
CTNND1O60716 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.87□□□□□ -1.63
CTNND1O60716 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.87□□□□□ -1.63
CTNND1O60716 SUMO2P2-201ENST00000456482 255 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC091564.1-201ENST00000464563 479 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC087312.1-201ENST00000471411 480 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 OR2A20P-203ENST00000498397 1268 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 POU5F1P7-201ENST00000508759 541 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC024589.1-201ENST00000512207 263 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 RNA5SP143-201ENST00000516936 115 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNND1O60716 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 COX6CP8-201ENST00000522620 226 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC022882.1-201ENST00000532142 501 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC068587.4-201ENST00000533893 186 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNND1O60716 MIR5685-201ENST00000579080 79 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNND1O60716 SLC25A36P1-201ENST00000590111 465 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AP001981.2-201ENST00000603241 418 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC090186.1-201ENST00000605991 572 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC097468.3-201ENST00000607956 456 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AL445264.1-201ENST00000621719 171 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC039056.2-201ENST00000622261 511 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 MIR6500-201ENST00000622700 86 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 AC139792.2-201ENST00000624218 587 ntBASIC4.87□□□□□ -1.63
CTNND1O60716 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNND1O60716 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTNND1O60716 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTNND1O60716 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CTNND1O60716 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTNND1O60716 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTNND1O60716 RNU6-289P-201ENST00000364093 107 ntBASIC4.86□□□□□ -1.63
CTNND1O60716 RNU6-777P-201ENST00000364265 104 ntBASIC4.86□□□□□ -1.63
CTNND1O60716 Y_RNA.318-201ENST00000365131 97 ntBASIC4.86□□□□□ -1.63
CTNND1O60716 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms