Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 U8.6-201ENST00000364939 135 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 Y_RNA.357-201ENST00000365487 109 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GFRA3O60609 GSTA6P-201ENST00000424144 582 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA3O60609 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.07□□□□□ -1.44
GFRA3O60609 AC073410.1-201ENST00000435125 589 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 PPIAP10-201ENST00000438675 458 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA3O60609 AP000893.1-201ENST00000474462 794 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA3O60609 AC132942.1-201ENST00000486753 483 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 RN7SL547P-201ENST00000490793 290 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.07□□□□□ -1.44
GFRA3O60609 RNU4ATAC15P-201ENST00000516415 126 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 FAM60DP-201ENST00000524174 632 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA3O60609 OR1F2P-201ENST00000570470 933 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 FAM106CP-201ENST00000582212 507 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
GFRA3O60609 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 AC016583.1-201ENST00000624221 2431 ntBASIC6.07□□□□□ -1.44
GFRA3O60609 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 UBE2WP1-201ENST00000362030 340 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 Y_RNA.23-201ENST00000362496 106 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 RNU6-960P-201ENST00000364056 120 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 Y_RNA.495-201ENST00000384435 112 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 Y_RNA.571-201ENST00000384753 98 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA3O60609 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA3O60609 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA3O60609 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 RPL23AP4-201ENST00000427757 463 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC126120.1-201ENST00000431082 470 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AL159987.2-201ENST00000432754 307 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA3O60609 RPL23AP60-201ENST00000450011 454 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA3O60609 GEMIN2P1-201ENST00000454246 752 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 RN7SL346P-201ENST00000491561 294 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.06□□□□□ -1.44
GFRA3O60609 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 ACA59.1-201ENST00000515966 143 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 RNU6-798P-201ENST00000516912 103 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 SNORA43.3-201ENST00000517240 103 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC007458.1-201ENST00000542812 373 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA3O60609 COX6CP3-201ENST00000580869 223 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.06□□□□□ -1.44
GFRA3O60609 AC012443.1-201ENST00000605605 231 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 AC090220.1-201ENST00000593078 1699 ntBASIC6.06□□□□□ -1.44
GFRA3O60609 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.06□□□□□ -1.44
GFRA3O60609 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.06□□□□□ -1.44
GFRA3O60609 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GFRA3O60609 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
GFRA3O60609 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.05□□□□□ -1.44
GFRA3O60609 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GFRA3O60609 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.05□□□□□ -1.44
GFRA3O60609 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.05□□□□□ -1.44
GFRA3O60609 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms