Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 TPMTP2-201ENST00000414372 726 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC234781.2-201ENST00000426370 994 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC006548.1-201ENST00000427470 102 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AL035407.1-201ENST00000429211 571 ntBASIC3.72□□□□□ -1.81
SSX4O60224 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX4O60224 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX4O60224 UBE2V1P3-201ENST00000439651 417 ntBASIC3.72□□□□□ -1.81
SSX4O60224 HSPE1P28-201ENST00000443139 211 ntBASIC3.72□□□□□ -1.81
SSX4O60224 ARPC3P5-201ENST00000448802 534 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 AC087312.1-201ENST00000471411 480 ntBASIC3.72□□□□□ -1.81
SSX4O60224 SYPL1P1-201ENST00000473622 768 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX4O60224 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 MTCYBP43-201ENST00000513621 740 ntBASIC3.72□□□□□ -1.81
SSX4O60224 RNU6-27P-201ENST00000516146 107 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX4O60224 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC239860.2-201ENST00000525886 270 ntBASIC3.72□□□□□ -1.81
SSX4O60224 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.72□□□□□ -1.81
SSX4O60224 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 VN1R92P-201ENST00000598511 928 ntBASIC3.72□□□□□ -1.81
SSX4O60224 IGHV3-29-201ENST00000604817 344 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC018714.1-201ENST00000605028 208 ntBASIC3.72□□□□□ -1.81
SSX4O60224 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.72□□□□□ -1.81
SSX4O60224 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.72□□□□□ -1.81
SSX4O60224 CR381572.1-201ENST00000625098 102 ntBASIC3.72□□□□□ -1.81
SSX4O60224 BDP1P-201ENST00000582658 1990 ntBASIC3.72□□□□□ -1.81
SSX4O60224 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.72□□□□□ -1.81
SSX4O60224 DDX43P2-201ENST00000604753 1354 ntBASIC3.72□□□□□ -1.81
SSX4O60224 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
SSX4O60224 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
SSX4O60224 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
SSX4O60224 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSX4O60224 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.81
SSX4O60224 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNU1-18P-201ENST00000363062 164 ntBASIC3.71□□□□□ -1.82
SSX4O60224 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 MIR23B-201ENST00000384832 97 ntBASIC3.71□□□□□ -1.82
SSX4O60224 MIR134-201ENST00000385258 73 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNU6-821P-201ENST00000390995 107 ntBASIC3.71□□□□□ -1.82
SSX4O60224 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX4O60224 AL031679.1-201ENST00000400616 525 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
SSX4O60224 SNORA11F-201ENST00000408237 128 ntBASIC3.71□□□□□ -1.82
SSX4O60224 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNA5SP317-201ENST00000410176 116 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNA5SP311-201ENST00000411290 116 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 AL132765.1-201ENST00000434165 553 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RPL23AP52-201ENST00000439311 478 ntBASIC3.71□□□□□ -1.82
SSX4O60224 VN1R32P-201ENST00000452234 905 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNU7-125P-201ENST00000458760 62 ntBASIC3.71□□□□□ -1.82
SSX4O60224 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX4O60224 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX4O60224 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.71□□□□□ -1.82
SSX4O60224 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX4O60224 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX4O60224 RNA5SP315-201ENST00000516340 116 ntBASIC3.71□□□□□ -1.82
SSX4O60224 RNA5SP312-201ENST00000517068 116 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX4O60224 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 AC024224.1-201ENST00000538284 609 ntBASIC3.71□□□□□ -1.82
SSX4O60224 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 OR7K1P-201ENST00000546439 926 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX4O60224 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX4O60224 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.71□□□□□ -1.82
SSX4O60224 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 MIR5186-201ENST00000577504 120 ntBASIC3.71□□□□□ -1.82
SSX4O60224 MIR4644-201ENST00000579929 84 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.71□□□□□ -1.82
SSX4O60224 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 AC093227.2-201ENST00000589357 285 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AC024560.3-201ENST00000608482 349 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 AC007671.2-201ENST00000637344 619 ntBASIC3.71□□□□□ -1.82
SSX4O60224 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSX4O60224 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SSX4O60224 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
SSX4O60224 AL356473.1-201ENST00000406203 1408 ntBASIC3.7□□□□□ -1.82
SSX4O60224 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms