Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL513477.2-201ENST00000607858 568 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC131902.3-201ENST00000611767 581 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC015967.1-201ENST00000619893 476 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SGCEO43556 AC073348.1-201ENST00000623002 331 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AC091903.1-201ENST00000624322 454 ntBASIC2.84□□□□□ -1.95
SGCEO43556 CR381572.1-201ENST00000625098 102 ntBASIC2.84□□□□□ -1.95
SGCEO43556 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SGCEO43556 AL356118.1-201ENST00000635272 1078 ntBASIC2.84□□□□□ -1.95
SGCEO43556 LRRC77P-213ENST00000637727 880 ntBASIC2.84□□□□□ -1.95
SGCEO43556 AL645568.2-201ENST00000432815 1337 ntBASIC2.84□□□□□ -1.96
SGCEO43556 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SGCEO43556 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SGCEO43556 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SGCEO43556 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SGCEO43556 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SGCEO43556 RNA5SP119-201ENST00000362715 117 ntBASIC2.83□□□□□ -1.96
SGCEO43556 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SGCEO43556 RNU6-1151P-201ENST00000384684 107 ntBASIC2.83□□□□□ -1.96
SGCEO43556 TAF9BP1-201ENST00000396646 746 ntBASIC2.83□□□□□ -1.96
SGCEO43556 UBE2V1P11-201ENST00000411559 285 ntBASIC2.83□□□□□ -1.96
SGCEO43556 HMGB3P31-201ENST00000413333 595 ntBASIC2.83□□□□□ -1.96
SGCEO43556 UBE2V1P9-201ENST00000414760 368 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC008280.1-201ENST00000418851 412 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AL355994.1-201ENST00000424379 260 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC096632.1-201ENST00000427395 310 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AL390023.1-201ENST00000428836 262 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC114973.1-201ENST00000429057 632 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.83□□□□□ -1.96
SGCEO43556 TPTE2P1-204ENST00000435256 593 ntBASIC2.83□□□□□ -1.96
SGCEO43556 VN1R34P-201ENST00000447387 883 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AL445669.2-201ENST00000454425 421 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AL590639.1-201ENST00000456484 337 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC008155.2-201ENST00000464337 397 ntBASIC2.83□□□□□ -1.96
SGCEO43556 FTH1P2-201ENST00000466086 412 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC068724.1-201ENST00000487100 792 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC093278.1-201ENST00000494700 600 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC110794.1-201ENST00000505816 425 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.83□□□□□ -1.96
SGCEO43556 RNA5SP217-201ENST00000515959 91 ntBASIC2.83□□□□□ -1.96
SGCEO43556 RNU6-202P-201ENST00000515998 96 ntBASIC2.83□□□□□ -1.96
SGCEO43556 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.83□□□□□ -1.96
SGCEO43556 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.83□□□□□ -1.96
SGCEO43556 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
SGCEO43556 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.83□□□□□ -1.96
SGCEO43556 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.83□□□□□ -1.96
SGCEO43556 AC073387.2-201ENST00000604797 784 ntBASIC2.83□□□□□ -1.96
SGCEO43556 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 AC013468.1-201ENST00000608680 598 ntBASIC2.83□□□□□ -1.96
SGCEO43556 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 AC006111.3-201ENST00000622137 383 ntBASIC2.83□□□□□ -1.96
SGCEO43556 AP003400.6-201ENST00000624698 740 ntBASIC2.83□□□□□ -1.96
SGCEO43556 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.83□□□□□ -1.96
SGCEO43556 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.83□□□□□ -1.96
SGCEO43556 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SGCEO43556 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 RNA5SP258-201ENST00000362750 119 ntBASIC2.82□□□□□ -1.96
SGCEO43556 RNU6-339P-201ENST00000384310 107 ntBASIC2.82□□□□□ -1.96
SGCEO43556 MIR183-201ENST00000384958 110 ntBASIC2.82□□□□□ -1.96
SGCEO43556 SNORA11C-201ENST00000408532 129 ntBASIC2.82□□□□□ -1.96
SGCEO43556 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.82□□□□□ -1.96
SGCEO43556 RPL32P35-201ENST00000415214 394 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC097713.2-201ENST00000430199 356 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 RABEPKP1-201ENST00000440529 1026 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 GAPDHP39-201ENST00000481866 979 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC093663.2-201ENST00000484625 313 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.82□□□□□ -1.96
SGCEO43556 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 AC104108.1-201ENST00000509930 412 ntBASIC2.82□□□□□ -1.96
SGCEO43556 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.82□□□□□ -1.96
SGCEO43556 AC005412.1-201ENST00000580812 1049 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 AC128687.1-201ENST00000605304 619 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC135178.6-201ENST00000605314 398 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC008962.1-201ENST00000605729 304 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AL591516.1-201ENST00000611326 274 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC009464.1-201ENST00000615731 469 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC231759.1-201ENST00000616455 597 ntBASIC2.82□□□□□ -1.96
SGCEO43556 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 AC090617.7-201ENST00000623952 126 ntBASIC2.82□□□□□ -1.96
SGCEO43556 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.82□□□□□ -1.96
SGCEO43556 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms