Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.48□□□□□ -1.69
PROM1O43490 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PROM1O43490 AC010680.3-201ENST00000604215 520 ntBASIC4.48□□□□□ -1.69
PROM1O43490 AL391358.1-201ENST00000605342 190 ntBASIC4.48□□□□□ -1.69
PROM1O43490 AC104458.1-201ENST00000608243 463 ntBASIC4.48□□□□□ -1.69
PROM1O43490 AC009237.17-201ENST00000618111 748 ntBASIC4.48□□□□□ -1.69
PROM1O43490 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.48□□□□□ -1.69
PROM1O43490 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.48□□□□□ -1.69
PROM1O43490 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PROM1O43490 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PROM1O43490 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PROM1O43490 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
PROM1O43490 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PROM1O43490 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PROM1O43490 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.47□□□□□ -1.69
PROM1O43490 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 SDAD1P1-202ENST00000524156 2051 ntBASIC4.47□□□□□ -1.69
PROM1O43490 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
PROM1O43490 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.47□□□□□ -1.69
PROM1O43490 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 AC107081.3-201ENST00000612715 2034 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC126755.2-208ENST00000327792 462 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC138969.1-213ENST00000331436 462 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RNA5SP505-201ENST00000364748 108 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RN7SKP266-201ENST00000410232 287 ntBASIC4.47□□□□□ -1.69
PROM1O43490 Y_RNA.608-201ENST00000410647 95 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RN7SKP100-201ENST00000411258 284 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RNU6-195P-201ENST00000411352 109 ntBASIC4.47□□□□□ -1.69
PROM1O43490 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 RSU1P3-201ENST00000412878 835 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC119751.6-201ENST00000416712 186 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC069157.1-201ENST00000421749 137 ntBASIC4.47□□□□□ -1.69
PROM1O43490 NANOGP6-201ENST00000429190 847 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC068287.1-201ENST00000430283 295 ntBASIC4.47□□□□□ -1.69
PROM1O43490 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 ARPC3P1-201ENST00000437218 533 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 RPL22P17-201ENST00000438729 315 ntBASIC4.47□□□□□ -1.69
PROM1O43490 PGBD4P3-201ENST00000440731 581 ntBASIC4.47□□□□□ -1.69
PROM1O43490 MTND6P13-201ENST00000443510 523 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC112653.1-201ENST00000443851 386 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 FABP3P2-201ENST00000453169 399 ntBASIC4.47□□□□□ -1.69
PROM1O43490 MTND2P24-201ENST00000453434 806 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC012170.1-201ENST00000495139 359 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC022447.3-201ENST00000506865 495 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 RN7SKP276-201ENST00000516242 268 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RNA5SP360-201ENST00000516555 118 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 AP006289.1-201ENST00000538089 277 ntBASIC4.47□□□□□ -1.69
PROM1O43490 CENPUP2-201ENST00000555897 1186 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RPL21P7-201ENST00000557463 483 ntBASIC4.47□□□□□ -1.69
PROM1O43490 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 RPL26P30-202ENST00000602923 645 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AL512782.1-201ENST00000603093 364 ntBASIC4.47□□□□□ -1.69
PROM1O43490 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 AL590282.1-201ENST00000610379 1136 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.47□□□□□ -1.69
PROM1O43490 AC078899.5-201ENST00000612475 178 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC083809.1-201ENST00000615051 472 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AC136475.10-201ENST00000620253 385 ntBASIC4.47□□□□□ -1.69
PROM1O43490 MIR7703-201ENST00000620784 77 ntBASIC4.47□□□□□ -1.69
PROM1O43490 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.47□□□□□ -1.69
PROM1O43490 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
PROM1O43490 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 FARSBP1-201ENST00000435808 1778 ntBASIC4.47□□□□□ -1.69
PROM1O43490 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PROM1O43490 MFSD8-216ENST00000641147 4009 ntBASIC4.47□□□□□ -1.69
PROM1O43490 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PROM1O43490 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.69
PROM1O43490 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.46□□□□□ -1.69
PROM1O43490 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PROM1O43490 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PROM1O43490 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.46□□□□□ -1.69
PROM1O43490 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
PROM1O43490 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PROM1O43490 ERCC6-202ENST00000374127 1782 ntBASIC4.46□□□□□ -1.7
PROM1O43490 AC079741.1-201ENST00000321498 212 ntBASIC4.46□□□□□ -1.7
PROM1O43490 Y_RNA.70-201ENST00000362886 110 ntBASIC4.46□□□□□ -1.7
PROM1O43490 RNU6-797P-201ENST00000363101 109 ntBASIC4.46□□□□□ -1.7
PROM1O43490 SNORA72.1-201ENST00000363485 129 ntBASIC4.46□□□□□ -1.7
PROM1O43490 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
PROM1O43490 RNU6-921P-201ENST00000384361 107 ntBASIC4.46□□□□□ -1.7
PROM1O43490 DSTNP4-201ENST00000399472 474 ntBASIC4.46□□□□□ -1.7
PROM1O43490 MIR1305-201ENST00000408300 86 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms