Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR489-201ENST00000384923 84 ntBASIC3.93□□□□□ -1.78
CHD1O14646 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD1O14646 AC245291.1-201ENST00000419501 328 ntBASIC3.93□□□□□ -1.78
CHD1O14646 RPL23AP49-201ENST00000492925 468 ntBASIC3.93□□□□□ -1.78
CHD1O14646 RPS27AP18-201ENST00000515536 459 ntBASIC3.93□□□□□ -1.78
CHD1O14646 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.93□□□□□ -1.78
CHD1O14646 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD1O14646 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.93□□□□□ -1.78
CHD1O14646 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD1O14646 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.93□□□□□ -1.78
CHD1O14646 MIR6715B-201ENST00000637172 77 ntBASIC3.93□□□□□ -1.78
CHD1O14646 MTND5P28-201ENST00000438005 1594 ntBASIC3.93□□□□□ -1.78
CHD1O14646 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CHD1O14646 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD1O14646 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CHD1O14646 SPATA2P1-201ENST00000431223 2055 ntBASIC3.93□□□□□ -1.78
CHD1O14646 AC093010.3-201ENST00000570269 15214 ntBASIC3.93□□□□□ -1.78
CHD1O14646 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CHD1O14646 SPA17P1-201ENST00000416656 452 ntBASIC3.92□□□□□ -1.78
CHD1O14646 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
CHD1O14646 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.92□□□□□ -1.78
CHD1O14646 AC095050.2-201ENST00000510748 1458 ntBASIC3.92□□□□□ -1.78
CHD1O14646 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD1O14646 RN7SKP140-201ENST00000411196 284 ntBASIC3.92□□□□□ -1.78
CHD1O14646 DYNLL1P6-201ENST00000503440 264 ntBASIC3.92□□□□□ -1.78
CHD1O14646 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CHD1O14646 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD1O14646 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD1O14646 GNAI2P1-201ENST00000541815 315 ntBASIC3.92□□□□□ -1.78
CHD1O14646 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD1O14646 AP004247.3-201ENST00000608682 624 ntBASIC3.92□□□□□ -1.78
CHD1O14646 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.92□□□□□ -1.78
CHD1O14646 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CHD1O14646 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD1O14646 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CHD1O14646 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD1O14646 RNA5SP383-201ENST00000362934 120 ntBASIC3.91□□□□□ -1.78
CHD1O14646 AL451074.5-201ENST00000415894 435 ntBASIC3.91□□□□□ -1.78
CHD1O14646 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHD1O14646 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD1O14646 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD1O14646 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD1O14646 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.91□□□□□ -1.78
CHD1O14646 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.91□□□□□ -1.78
CHD1O14646 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHD1O14646 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.91□□□□□ -1.78
CHD1O14646 PWAR6-201ENST00000552334 4618 ntBASIC3.91□□□□□ -1.78
CHD1O14646 AL450326.2-201ENST00000421913 1962 ntBASIC3.9□□□□□ -1.78
CHD1O14646 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHD1O14646 MIR365B-201ENST00000362317 111 ntBASIC3.9□□□□□ -1.78
CHD1O14646 RN7SKP44-201ENST00000363602 316 ntBASIC3.9□□□□□ -1.78
CHD1O14646 AL512633.1-201ENST00000399931 655 ntBASIC3.9□□□□□ -1.78
CHD1O14646 USP9YP20-201ENST00000419224 558 ntBASIC3.9□□□□□ -1.78
CHD1O14646 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.9□□□□□ -1.78
CHD1O14646 AP004217.1-201ENST00000480579 346 ntBASIC3.9□□□□□ -1.78
CHD1O14646 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD1O14646 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD1O14646 AK6P1-201ENST00000540219 478 ntBASIC3.9□□□□□ -1.78
CHD1O14646 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.9□□□□□ -1.78
CHD1O14646 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.9□□□□□ -1.78
CHD1O14646 AC004825.2-201ENST00000616634 455 ntBASIC3.9□□□□□ -1.78
CHD1O14646 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
CHD1O14646 RNA5SP88-201ENST00000365560 109 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AL023284.1-201ENST00000403956 276 ntBASIC3.9□□□□□ -1.79
CHD1O14646 RNA5SP107-201ENST00000411358 122 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC108667.1-201ENST00000428618 249 ntBASIC3.9□□□□□ -1.79
CHD1O14646 VDAC1P3-201ENST00000434069 851 ntBASIC3.9□□□□□ -1.79
CHD1O14646 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.9□□□□□ -1.79
CHD1O14646 AC104389.3-201ENST00000445629 235 ntBASIC3.9□□□□□ -1.79
CHD1O14646 RN7SL75P-201ENST00000461926 281 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC117522.2-201ENST00000510049 657 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC112673.1-201ENST00000513168 575 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD1O14646 AL133271.1-201ENST00000538229 291 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC026464.5-201ENST00000562497 722 ntBASIC3.9□□□□□ -1.79
CHD1O14646 AC122134.1-201ENST00000565664 1104 ntBASIC3.9□□□□□ -1.79
CHD1O14646 snoU13.31-201ENST00000607291 104 ntBASIC3.9□□□□□ -1.79
CHD1O14646 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD1O14646 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD1O14646 AC011460.1-201ENST00000636268 1834 ntBASIC3.89□□□□□ -1.79
CHD1O14646 RNU1-91P-201ENST00000364746 163 ntBASIC3.89□□□□□ -1.79
CHD1O14646 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CHD1O14646 AL355836.1-201ENST00000555951 870 ntBASIC3.89□□□□□ -1.79
CHD1O14646 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD1O14646 AL606537.1-201ENST00000607258 2011 ntBASIC3.89□□□□□ -1.79
CHD1O14646 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD1O14646 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CHD1O14646 MIR423-201ENST00000362201 94 ntBASIC3.88□□□□□ -1.79
CHD1O14646 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD1O14646 MIR137-201ENST00000385223 102 ntBASIC3.88□□□□□ -1.79
CHD1O14646 EXTL2P1-201ENST00000446218 416 ntBASIC3.88□□□□□ -1.79
CHD1O14646 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.88□□□□□ -1.79
CHD1O14646 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.88□□□□□ -1.79
CHD1O14646 AC135628.1-201ENST00000568867 534 ntBASIC3.88□□□□□ -1.79
CHD1O14646 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD1O14646 CUL1P1-201ENST00000509510 2425 ntBASIC3.88□□□□□ -1.79
CHD1O14646 LINC01355-201ENST00000566551 5444 ntBASIC3.88□□□□□ -1.79
CHD1O14646 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.87□□□□□ -1.79
CHD1O14646 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CHD1O14646 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms