Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGN4O00479 RPL23AP83-201ENST00000434984 473 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGN4O00479 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGN4O00479 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HMGN4O00479 HMGN2P21-201ENST00000447764 270 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 PTGES3P5-201ENST00000455109 434 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 OR6K1P-201ENST00000456766 971 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 RN7SL432P-201ENST00000484057 298 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC087190.1-201ENST00000484462 480 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC098799.2-201ENST00000509466 868 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC022790.1-201ENST00000522872 204 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGN4O00479 OR4R2P-201ENST00000530815 597 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC034268.2-201ENST00000571784 482 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC007621.1-201ENST00000604544 437 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 AC004832.5-201ENST00000608677 401 ntBASIC2.21□□□□□ -2.06
HMGN4O00479 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGN4O00479 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HMGN4O00479 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGN4O00479 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGN4O00479 FAM35CP-201ENST00000554755 2470 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HMGN4O00479 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGN4O00479 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGN4O00479 ZNF271P-202ENST00000465539 1970 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGN4O00479 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 MIR483-201ENST00000385070 76 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 RNA5SP105-201ENST00000391123 113 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.2□□□□□ -2.06
HMGN4O00479 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGN4O00479 Z92545.1-201ENST00000411782 234 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGN4O00479 AC104332.2-201ENST00000429959 156 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGN4O00479 SETP8-201ENST00000435341 628 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC005002.1-201ENST00000447458 540 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGN4O00479 HAUS1P1-201ENST00000505275 832 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC005921.1-201ENST00000510589 286 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 RNU4-29P-201ENST00000515943 174 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 SNORA31.1-201ENST00000515993 133 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 SNORA31.5-201ENST00000516190 133 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGN4O00479 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGN4O00479 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGN4O00479 AC025281.1-201ENST00000567026 265 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGN4O00479 AC011468.4-201ENST00000603942 409 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC103810.6-201ENST00000606708 136 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC104237.2-201ENST00000612456 443 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC016542.2-201ENST00000624201 619 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 AC079228.1-201ENST00000624774 1049 ntBASIC2.2□□□□□ -2.06
HMGN4O00479 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGN4O00479 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HMGN4O00479 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGN4O00479 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGN4O00479 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HMGN4O00479 RNU6-225P-201ENST00000384613 103 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 HMGB1P10-201ENST00000395823 563 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AP000567.1-201ENST00000406413 156 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 PRELID3BP11-201ENST00000414230 479 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 VN1R31P-201ENST00000417498 730 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 AL031736.2-201ENST00000426573 787 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 MTCO3P21-201ENST00000430791 643 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 CR769767.1-201ENST00000436337 346 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 CBX1P4-201ENST00000439415 457 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGN4O00479 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 AL831737.1-201ENST00000441288 271 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 LINC00888-204ENST00000487386 421 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HMGN4O00479 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGN4O00479 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC087241.2-201ENST00000535801 324 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC078814.3-201ENST00000553036 491 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGN4O00479 AC123768.4-201ENST00000616244 701 ntBASIC2.19□□□□□ -2.06
HMGN4O00479 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HMGN4O00479 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms