Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 ZNF192P1-203ENST00000565888 810 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC122133.1-201ENST00000613964 233 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AL590099.1-201ENST00000615276 138 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AC010608.2-201ENST00000624830 470 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 MTCO1P9-201ENST00000505577 1534 ntBASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PCDHGB3Q9Y5G1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RNU6-433P-201ENST00000363216 104 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 Y_RNA.169-201ENST00000363745 96 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 SNORD6-201ENST00000365444 73 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RNU6-1207P-201ENST00000384343 107 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 TPMTP3-201ENST00000411928 735 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC016397.1-201ENST00000412463 242 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 Z99497.1-201ENST00000421282 135 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC009220.1-201ENST00000451614 275 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RNU7-125P-201ENST00000458760 62 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RPS4XP13-201ENST00000483219 789 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 HSPE1P23-201ENST00000509838 286 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LTV1P1-201ENST00000510683 1237 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 IGKV2D-23-201ENST00000518179 286 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AL357094.1-201ENST00000603845 844 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AC023043.4-201ENST00000612081 449 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 AL355810.1-201ENST00000614629 552 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 MIR7703-201ENST00000620784 77 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGB3Q9Y5G1 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 RNU6-50P-201ENST00000362356 103 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 RNA5SP151-201ENST00000365632 117 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 RAB28P1-201ENST00000411517 641 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC234775.1-201ENST00000454247 670 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 ANP32BP2-201ENST00000454525 545 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC091564.1-201ENST00000464563 479 ntBASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHGB3Q9Y5G1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms