Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MTND4P34-201ENST00000572715 1371 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 Y_RNA.51-201ENST00000362725 102 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 SNORA4.1-201ENST00000364263 144 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RNU6-115P-201ENST00000364310 107 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 SNORD3H-201ENST00000384486 214 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 HLFP1-201ENST00000402375 499 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AL590704.1-201ENST00000402856 794 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RPL31P52-201ENST00000407532 367 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 SNORA11-201ENST00000408789 128 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RAB9AP3-201ENST00000412737 573 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC004552.1-201ENST00000419089 348 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AL391219.1-201ENST00000422570 483 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AL589823.1-201ENST00000429577 183 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC007389.2-201ENST00000434630 306 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MTCO2P16-201ENST00000436962 677 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RAB9AP1-201ENST00000449393 573 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AL645939.1-201ENST00000453429 797 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MTND4LP3-201ENST00000468320 276 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RPS26P3-201ENST00000470205 348 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC006511.1-201ENST00000470614 315 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC090543.2-201ENST00000483963 348 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC004057.1-201ENST00000485827 348 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC092045.1-201ENST00000495716 1231 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 RPL7L1P13-201ENST00000511702 739 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MTND5P13-201ENST00000513046 1079 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 Y_RNA.655-201ENST00000515919 96 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MED28P5-201ENST00000528254 438 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC093519.1-201ENST00000566109 298 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC005951.1-201ENST00000576706 485 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AP001981.2-201ENST00000603241 418 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AP000811.1-201ENST00000603803 651 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC112230.1-201ENST00000604342 547 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC112220.3-201ENST00000605502 502 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 Z69908.1-201ENST00000622603 247 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC000123.2-201ENST00000623124 461 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 AC012442.3-202ENST00000636742 206 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
SIX4Q9UIU6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX4Q9UIU6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AL136964.1-201ENST00000622038 2990 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 AC018555.1-201ENST00000567548 1980 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 Y_RNA.201-201ENST00000364052 96 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 RNU6-253P-201ENST00000384730 105 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MIR554-201ENST00000384874 96 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 PIGPP2-201ENST00000411569 458 ntBASIC4.02□□□□□ -1.77
SIX4Q9UIU6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX4Q9UIU6 HSFY4P-201ENST00000415994 1181 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms