Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 CYCSP2-201ENST00000558168 301 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 MIR4700-201ENST00000578311 74 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC023575.1-201ENST00000580510 358 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 KLKP1-201ENST00000595979 403 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 IGHV3-29-201ENST00000604817 344 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC025588.4-201ENST00000615802 908 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 AC017037.3-201ENST00000625016 472 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 CEP170P1-201ENST00000502249 4587 ntBASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.13□□□□□ -1.75
LIMA1Q9UHB6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC095050.2-201ENST00000510748 1458 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC090337.1-201ENST00000579651 2074 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 RNU6-931P-201ENST00000363850 107 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 SNORA4.1-201ENST00000364263 144 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 RNA5SP97-201ENST00000365006 84 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 DHFRP6-201ENST00000401776 268 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AL138878.1-201ENST00000405131 347 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 MTCYBP38-201ENST00000417160 1123 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 GLRXP1-201ENST00000423261 334 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 USP9YP7-201ENST00000436723 430 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 RPS29P31-201ENST00000446147 164 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC104978.1-201ENST00000449387 391 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 USP9YP32-201ENST00000452432 430 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 RPS20P24-201ENST00000457473 361 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 SYPL1P1-201ENST00000473622 768 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC093281.2-201ENST00000510153 597 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 HSPA8P13-201ENST00000523715 472 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AL139174.1-201ENST00000531489 886 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 ZNF321P-202ENST00000550843 495 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC006960.3-201ENST00000561845 705 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 MIR4284-201ENST00000578924 81 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 MIR4738-201ENST00000579134 87 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC004987.4-201ENST00000603383 338 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AL592436.1-201ENST00000605135 558 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC006329.2-201ENST00000611491 394 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 MIR7641-1-201ENST00000627518 61 ntBASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.12□□□□□ -1.75
LIMA1Q9UHB6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 RNU6-878P-201ENST00000384578 110 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 U3.29-201ENST00000391296 212 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 SOD2P1-201ENST00000396543 562 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 RPL21P65-201ENST00000406094 466 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 RN7SKP177-201ENST00000410567 355 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 RNU4-78P-201ENST00000410940 126 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 CYP4F29P-201ENST00000420685 446 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AL953862.1-201ENST00000423016 168 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC092447.3-201ENST00000426027 686 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 MTCYBP34-201ENST00000439552 670 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 MTCO3P11-201ENST00000455103 774 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC090453.1-201ENST00000495560 436 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 DUXAP5-201ENST00000529668 529 ntBASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.11□□□□□ -1.75
LIMA1Q9UHB6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms