Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 EEF1E1P1-201ENST00000446998 430 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC012170.1-201ENST00000495139 359 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC146944.2-203ENST00000502493 354 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC139495.1-202ENST00000513164 354 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC015795.1-201ENST00000513669 327 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 RNU6-202P-201ENST00000515998 96 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AP000790.1-201ENST00000528891 737 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AP002453.2-201ENST00000533503 320 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 OR6C73P-201ENST00000546432 358 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC090502.2-201ENST00000549267 280 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AL356218.2-201ENST00000605264 187 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC012409.3-201ENST00000611343 981 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 AC243773.3-201ENST00000613270 256 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.57□□□□□ -1.68
DKK3Q9UBP4 LINC00622-201ENST00000562811 1570 ntBASIC4.57□□□□□ -1.68
DKK3Q9UBP4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU1-108P-201ENST00000362556 161 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 Y_RNA.248-201ENST00000364501 109 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU5E-5P-201ENST00000365379 116 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU5A-6P-201ENST00000384136 116 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SNORA57.1-201ENST00000391227 145 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC025750.1-201ENST00000399891 379 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 HDGFP1-201ENST00000405943 252 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 VN1R8P-201ENST00000407739 893 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU2-28P-201ENST00000410457 189 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU6-248P-201ENST00000410720 107 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNA5SP104-201ENST00000410989 118 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL356387.2-201ENST00000422272 243 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SDCBPP2-201ENST00000424643 885 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC010881.1-201ENST00000433830 235 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RPL37P21-201ENST00000435890 276 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC092427.1-201ENST00000439177 601 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 PDSS1P2-201ENST00000449397 678 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 OR4G11P-201ENST00000492842 939 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC105252.1-201ENST00000503089 286 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 KRT19P6-201ENST00000510983 209 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 RNU6-506P-201ENST00000516553 94 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 PAICSP4-201ENST00000517543 1253 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SOD1P3-201ENST00000518682 454 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 OR4A12P-201ENST00000530847 918 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SERPINE4P-201ENST00000554978 281 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.56□□□□□ -1.68
DKK3Q9UBP4 SULT1C2P1-202ENST00000562418 459 ntBASIC4.56□□□□□ -1.68
DKK3Q9UBP4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms