Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 RN7SKP145-201ENST00000363291 303 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 Y_RNA.133-201ENST00000363428 110 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 Y_RNA.187-201ENST00000363918 113 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 RNU6-278P-201ENST00000390945 109 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 RNU4-34P-201ENST00000410431 124 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 RNU2-39P-201ENST00000410604 198 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 RPL12P34-201ENST00000424532 479 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 MRPS21P2-201ENST00000424704 264 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC093655.2-201ENST00000425735 631 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 MTATP6P16-201ENST00000434543 526 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 RPL12P46-201ENST00000436610 195 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC073465.2-201ENST00000440938 498 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC005532.2-201ENST00000467154 373 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC092754.1-201ENST00000472975 479 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AL136126.1-201ENST00000473603 402 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 ST13P14-201ENST00000474095 734 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 RN7SL222P-201ENST00000476452 299 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 OR4P1P-201ENST00000530808 1136 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC018630.1-201ENST00000541376 925 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC007448.1-201ENST00000582714 234 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC069307.1-201ENST00000602820 447 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC006006.1-201ENST00000603082 144 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC008782.1-201ENST00000603386 430 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AL592436.1-201ENST00000605135 558 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC019193.3-201ENST00000609144 554 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC018445.2-201ENST00000622987 260 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 PANDAR-201ENST00000629595 1506 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 AL078621.3-201ENST00000623707 2042 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.82□□□□□ -1.48
CNTN3Q9P232 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 MTND4P14-201ENST00000435799 1354 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AL138713.1-201ENST00000624026 2130 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC011978.2-201ENST00000569835 2054 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 SNORA22B-201ENST00000383876 138 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 DPPA2P3-201ENST00000411853 655 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC074085.1-201ENST00000413598 418 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 RPS11P7-201ENST00000442125 465 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 RPS29P15-201ENST00000458329 171 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 FTH1P24-201ENST00000503502 462 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 RNA5SP373-201ENST00000517271 95 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC128657.1-201ENST00000549459 145 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 SNRPGP18-201ENST00000553000 214 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 COX6CP3-201ENST00000580869 223 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC124312.5-201ENST00000604451 268 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC245389.1-201ENST00000605141 529 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC126915.2-201ENST00000610957 190 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC015908.5-201ENST00000623289 343 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 AC007529.1-201ENST00000418574 2178 ntBASIC5.81□□□□□ -1.48
CNTN3Q9P232 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTN3Q9P232 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CNTN3Q9P232 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 NXPH1-205ENST00000602349 1953 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC109780.1-201ENST00000451768 1344 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 RNU6-1105P-201ENST00000384774 107 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 MIR19A-201ENST00000384878 82 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms