Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC007179.3-201ENST00000604976 235 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AC092354.2-201ENST00000607786 514 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 MIR7851-201ENST00000610611 160 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 AL590240.3-201ENST00000621416 943 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 ZNF849P-201ENST00000594711 1566 ntBASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLHL28Q9NXS3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RNU6-619P-201ENST00000365146 108 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 MIR34B-201ENST00000385076 84 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 SAR1AP2-201ENST00000392696 594 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AP002784.2-201ENST00000397300 549 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RN7SKP53-201ENST00000411337 315 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC245052.5-201ENST00000416320 649 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 YPEL5P1-201ENST00000419731 367 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC246680.2-201ENST00000422106 389 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RPL21P40-201ENST00000428586 483 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RPL23AP83-201ENST00000434984 473 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC004022.1-201ENST00000447766 1066 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC104978.1-201ENST00000449387 391 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 NAP1L1P3-201ENST00000462291 880 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 PLGLA-201ENST00000465668 449 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RPL23AP14-201ENST00000468281 468 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC078857.1-201ENST00000469870 667 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC087312.1-201ENST00000471411 480 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RPS4XP22-201ENST00000480755 780 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC112518.2-201ENST00000508565 425 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC121161.1-201ENST00000510606 652 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC119751.1-201ENST00000513357 765 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 HMGN1P15-201ENST00000513870 295 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 OR5B10P-201ENST00000532869 642 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 UBE2NP1-201ENST00000545592 458 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 NIFKP8-201ENST00000560500 874 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC124283.4-201ENST00000581815 456 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC006116.10-201ENST00000591836 581 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC010591.1-201ENST00000603941 649 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AL161756.2-201ENST00000604597 246 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 DPRXP5-201ENST00000604662 539 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AL365503.1-201ENST00000605247 905 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AC011816.2-201ENST00000607089 556 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 AL451074.6-201ENST00000608512 729 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.24□□□□□ -1.89
KLHL28Q9NXS3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 RNU6-989P-201ENST00000362756 107 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 RNVU1-3-201ENST00000364313 161 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 RNA5SP72-201ENST00000364442 117 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 MRPL50P2-201ENST00000416821 482 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC073063.1-201ENST00000434352 607 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.23□□□□□ -1.89
KLHL28Q9NXS3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms