Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC008737.2-201ENST00000599446 118 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 VN1R107P-201ENST00000601784 209 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 AC007687.1-201ENST00000602704 304 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 AL162413.1-201ENST00000603198 110 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG3Q9NT62 AC090948.2-201ENST00000607363 564 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 uc_338.9-201ENST00000617424 182 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 7SK.10-201ENST00000621414 298 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 U3.53-201ENST00000628922 216 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG3Q9NT62 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
ATG3Q9NT62 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG3Q9NT62 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ATG3Q9NT62 ZNF137P-201ENST00000456718 1920 ntBASIC6.07□□□□□ -1.44
ATG3Q9NT62 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ATG3Q9NT62 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.07□□□□□ -1.44
ATG3Q9NT62 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ATG3Q9NT62 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
ATG3Q9NT62 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC063976.2-201ENST00000425667 3556 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 FARSBP1-201ENST00000435808 1778 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 RNA5SP388-201ENST00000362584 119 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 U8.3-201ENST00000363321 132 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 SNORA51.12-201ENST00000384448 134 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 U8.14-201ENST00000390843 143 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 MIR548P-201ENST00000408336 84 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 CTSL3P-202ENST00000412179 788 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 OR9R1P-201ENST00000412200 877 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC007738.1-201ENST00000413892 348 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AP001324.1-201ENST00000428553 399 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL451139.1-201ENST00000434718 346 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL353093.1-201ENST00000441292 436 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 ZFRP1-201ENST00000457579 2970 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC007182.2-201ENST00000489251 402 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 RPL35P6-201ENST00000490024 372 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC007224.1-201ENST00000564410 144 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 BNIP3P23-201ENST00000599655 511 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 PRELID3BP8-201ENST00000604148 295 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL442067.1-201ENST00000613261 223 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AL132822.1-201ENST00000617063 513 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC009268.2-201ENST00000621925 457 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 RMST_7.1-201ENST00000621935 268 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 AC134503.1-201ENST00000633048 54 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.06□□□□□ -1.44
ATG3Q9NT62 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ATG3Q9NT62 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ATG3Q9NT62 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 SNORA62.2-201ENST00000364672 152 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 RNU6-359P-201ENST00000365466 108 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 MIR16-1-201ENST00000385271 89 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 AL590762.2-201ENST00000395798 571 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 AL354719.1-201ENST00000406535 843 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AL356387.2-201ENST00000422272 243 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 MTCO2P5-201ENST00000422621 426 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ATG3Q9NT62 ISCA1P6-201ENST00000427740 390 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 AL590639.1-201ENST00000456484 337 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 Y_RNA.632-201ENST00000459189 102 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 RPL21P126-201ENST00000470049 478 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC103851.1-201ENST00000506833 274 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.05□□□□□ -1.44
ATG3Q9NT62 RPL21P5-201ENST00000554662 472 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 MIR3936-201ENST00000584304 110 ntBASIC6.05□□□□□ -1.44
ATG3Q9NT62 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms