Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CISHQ9NSE2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.87□□□□□ -1.95
CISHQ9NSE2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CISHQ9NSE2 AC007256.1-201ENST00000392253 2765 ntBASIC2.87□□□□□ -1.95
CISHQ9NSE2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 RNU6-317P-201ENST00000384031 107 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AL356057.3-201ENST00000402607 340 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CISHQ9NSE2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 OR4K6P-201ENST00000416478 897 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC241520.1-201ENST00000422654 1099 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 MTCO3P17-201ENST00000443775 513 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 MRPL50P4-201ENST00000446432 475 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC104308.1-201ENST00000454621 333 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 PTGES3P5-201ENST00000455109 434 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 RPL23AP31-201ENST00000456160 467 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 HMGN2P16-201ENST00000456802 261 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 RPS27AP1-201ENST00000475545 471 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC012181.1-201ENST00000479895 423 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC092185.1-201ENST00000491371 97 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 TMEM248P1-201ENST00000510579 951 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC093755.1-201ENST00000512950 1023 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC108120.2-201ENST00000512973 294 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC034159.1-201ENST00000513885 583 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 SNORA31.21-201ENST00000517180 77 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 CENPUP2-201ENST00000555897 1186 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC115989.2-201ENST00000578640 563 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AL137843.1-201ENST00000605078 385 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CISHQ9NSE2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 FRG1DP-201ENST00000635586 771 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.86□□□□□ -1.95
CISHQ9NSE2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.86□□□□□ -1.95
CISHQ9NSE2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CISHQ9NSE2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CISHQ9NSE2 RNU2-6P-201ENST00000411404 190 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 HSFY1P1-201ENST00000423928 1178 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC012498.1-201ENST00000424037 437 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC091390.3-201ENST00000426478 338 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AL390023.1-201ENST00000428836 262 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 HMGB1P12-201ENST00000438594 598 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 C1DP3-201ENST00000455013 423 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 NCOR1P1-202ENST00000486162 291 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 VN1R104P-201ENST00000505115 1009 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC021146.7-201ENST00000509604 775 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 RNU6-1308P-201ENST00000516817 103 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 OR8L1P-201ENST00000534005 955 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC106782.4-201ENST00000568264 210 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 MIR4635-201ENST00000583759 79 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC245128.3-201ENST00000594721 748 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CISHQ9NSE2 AC007619.2-201ENST00000605743 379 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 HMGN2P28-201ENST00000606102 262 ntBASIC2.85□□□□□ -1.95
CISHQ9NSE2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CISHQ9NSE2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CISHQ9NSE2 RNU6-600P-201ENST00000362524 99 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 RNU6-525P-201ENST00000363685 104 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 SNORA7.2-201ENST00000364446 145 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 EI24P1-201ENST00000416584 867 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 YPEL5P1-201ENST00000419731 367 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 RNF19BPX-201ENST00000426224 625 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 TRIAP1P1-201ENST00000427062 225 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 ARL5AP3-201ENST00000439327 386 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 TRIM60P18-201ENST00000441518 828 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CISHQ9NSE2 SNORD109B-201ENST00000458961 67 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 SNORD109A-201ENST00000459128 67 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 RPL21P18-201ENST00000469899 480 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms