Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPL23AP44-201ENST00000482216 473 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RPL23AP73-201ENST00000492507 471 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 OR5H5P-201ENST00000503164 928 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 OR5AP1P-201ENST00000529730 940 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC004217.3-201ENST00000551552 878 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 OR4T1P-201ENST00000554933 911 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL450489.1-201ENST00000612071 468 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC068831.7-201ENST00000616954 363 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 AP006248.3-201ENST00000623580 594 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 MTND5P31-201ENST00000419366 1374 ntBASIC3.5□□□□□ -1.85
TM9SF3Q9HD45 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 MIR634-201ENST00000385208 97 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 U3.19-201ENST00000390893 196 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RNU6-77P-201ENST00000410554 91 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 USP9YP19-201ENST00000412165 485 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AIMP1P1-201ENST00000418670 937 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RPS15AP6-201ENST00000420703 385 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC233981.1-201ENST00000423224 461 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 SNRPEP4-201ENST00000435815 279 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 TXNP1-201ENST00000441872 371 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RPL21P8-201ENST00000465083 535 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RPL6P9-201ENST00000466502 859 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RPS3AP50-201ENST00000487064 803 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC105914.1-201ENST00000511798 226 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC010265.1-201ENST00000513509 211 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RNU6-711P-201ENST00000517255 106 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC087272.1-201ENST00000523624 533 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 YPEL5P2-201ENST00000605553 359 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC090116.1-201ENST00000615679 446 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AL163051.2-201ENST00000618976 735 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AL590240.3-201ENST00000621416 943 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 AC058791.1-201ENST00000608412 3198 ntBASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TM9SF3Q9HD45 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 ZNF833P-201ENST00000424938 1494 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AL645568.2-201ENST00000432815 1337 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 BX323014.1-201ENST00000412876 237 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 SDCBPP2-201ENST00000424643 885 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 BTF3P5-201ENST00000457252 467 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 CYCSP20-201ENST00000473154 315 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AC093663.1-201ENST00000497190 394 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 MTND2P31-201ENST00000512602 616 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LSM6P2-201ENST00000552208 177 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 RMST_10.1-201ENST00000616309 154 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 MIR8057-201ENST00000620957 69 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 PWAR6-201ENST00000552334 4618 ntBASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.48□□□□□ -1.85
TM9SF3Q9HD45 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms