Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC017015.1-201ENST00000477387 286 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC015724.1-201ENST00000478577 156 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC126121.1-201ENST00000482313 553 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RPS27P23-201ENST00000487608 251 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC006445.1-201ENST00000491925 405 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC008427.1-201ENST00000503102 655 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC119751.4-201ENST00000507498 357 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 SNORA70.24-201ENST00000517233 118 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RN7SKP57-201ENST00000517248 293 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 IGJP1-201ENST00000522682 475 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC090312.2-201ENST00000582687 378 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL606834.3-201ENST00000602615 496 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC069304.3-201ENST00000603938 1084 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL713922.2-201ENST00000619384 716 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC099654.8-201ENST00000637757 681 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 RNA5SP374-201ENST00000362939 125 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 SNORD56.3-201ENST00000363507 71 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 RNU6-298P-201ENST00000390888 96 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC027644.1-201ENST00000419595 298 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 PTP4A1P7-201ENST00000423476 514 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC092634.2-201ENST00000428146 1010 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC016696.1-201ENST00000446949 318 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AP000893.1-201ENST00000474462 794 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC004217.3-201ENST00000551552 878 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 YWHAZP1-201ENST00000556286 722 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 NF1P5-201ENST00000588287 448 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AL158050.2-201ENST00000605336 568 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AF117829.1-206ENST00000621883 3802 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 AL590396.4-201ENST00000636779 956 ntBASIC3.68□□□□□ -1.82
RNF41Q9H4P4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF41Q9H4P4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC046144.1-201ENST00000478559 1853 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 RNU6-549P-201ENST00000384433 107 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC110754.1-201ENST00000399740 601 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AL603865.2-201ENST00000401679 213 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC004022.2-201ENST00000413824 193 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 USP9YP21-201ENST00000420603 432 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AL031736.2-201ENST00000426573 787 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC008885.2-201ENST00000509506 930 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC118942.1-201ENST00000529674 1035 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AL161713.1-201ENST00000555538 145 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AL020997.3-201ENST00000602843 359 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC011458.1-201ENST00000604034 617 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC097504.2-201ENST00000608088 454 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms