Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCA3Q99758 AC117529.2-201ENST00000512159 2068 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
ABCA3Q99758 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ABCA3Q99758 AL161781.1-201ENST00000354277 403 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 NCSTNP1-201ENST00000406229 144 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 HMGB3P23-201ENST00000414981 585 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 PTP4A1P5-201ENST00000420305 455 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 RPL36AP21-201ENST00000490372 323 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 RPL9P6-201ENST00000492764 598 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.33□□□□□ -1.88
ABCA3Q99758 OR8L1P-201ENST00000534005 955 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AC091515.1-201ENST00000548110 679 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 AC022884.3-201ENST00000579571 248 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
ABCA3Q99758 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ABCA3Q99758 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
ABCA3Q99758 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCA3Q99758 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCA3Q99758 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ABCA3Q99758 AC245517.2-201ENST00000442890 346 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.32□□□□□ -1.88
ABCA3Q99758 HMGN2P23-201ENST00000456759 269 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 RNU6-1231P-201ENST00000517185 103 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.32□□□□□ -1.88
ABCA3Q99758 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 AGGF1P8-201ENST00000562979 1000 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 AC067852.7-201ENST00000623270 535 ntBASIC3.32□□□□□ -1.88
ABCA3Q99758 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCA3Q99758 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ABCA3Q99758 DCAF13P3-201ENST00000561147 1334 ntBASIC3.31□□□□□ -1.88
ABCA3Q99758 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ABCA3Q99758 AL024474.1-201ENST00000404655 591 ntBASIC3.31□□□□□ -1.88
ABCA3Q99758 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCA3Q99758 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCA3Q99758 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.31□□□□□ -1.88
ABCA3Q99758 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.31□□□□□ -1.88
ABCA3Q99758 AC009318.2-201ENST00000610917 651 ntBASIC3.31□□□□□ -1.88
ABCA3Q99758 PISRT1-201ENST00000626175 531 ntBASIC3.31□□□□□ -1.88
ABCA3Q99758 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
ABCA3Q99758 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ABCA3Q99758 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.31□□□□□ -1.88
ABCA3Q99758 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.31□□□□□ -1.88
ABCA3Q99758 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ABCA3Q99758 Y_RNA.164-201ENST00000363709 102 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.3□□□□□ -1.88
ABCA3Q99758 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.3□□□□□ -1.88
ABCA3Q99758 MTND4P2-201ENST00000507767 1203 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AADACP1-206ENST00000561502 1193 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.3□□□□□ -1.88
ABCA3Q99758 U4.3-201ENST00000621047 82 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ABCA3Q99758 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ABCA3Q99758 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC069218.2-201ENST00000411665 344 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC007064.1-201ENST00000412238 351 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC106901.1-201ENST00000425086 698 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC119751.1-201ENST00000513357 765 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC083760.1-201ENST00000589621 670 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 AC103710.3-201ENST00000608157 948 ntBASIC3.3□□□□□ -1.88
ABCA3Q99758 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ABCA3Q99758 AC002543.1-201ENST00000299783 1954 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.29□□□□□ -1.88
ABCA3Q99758 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ABCA3Q99758 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ABCA3Q99758 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.29□□□□□ -1.88
ABCA3Q99758 AL512633.1-201ENST00000399931 655 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 RNA5SP239-201ENST00000410218 129 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 AL590399.6-201ENST00000446396 307 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 MRPL50P4-201ENST00000446432 475 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 RPL23AP45-201ENST00000476406 468 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.29□□□□□ -1.88
ABCA3Q99758 ACTR6P1-201ENST00000514311 1104 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 RANP3-201ENST00000530970 276 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.29□□□□□ -1.88
ABCA3Q99758 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.29□□□□□ -1.88
ABCA3Q99758 RPL23AP84-201ENST00000571193 464 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ABCA3Q99758 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ABCA3Q99758 MTND5P6-201ENST00000422338 1798 ntBASIC3.29□□□□□ -1.88
ABCA3Q99758 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ABCA3Q99758 RNU1-100P-201ENST00000365255 165 ntBASIC3.28□□□□□ -1.88
ABCA3Q99758 SNORD6-201ENST00000365444 73 ntBASIC3.28□□□□□ -1.88
ABCA3Q99758 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCA3Q99758 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms