Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 AL354941.1-201ENST00000438600 464 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 RPS26P30-201ENST00000443431 335 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MTCO1P19-201ENST00000443487 500 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 RPL12P26-201ENST00000452430 487 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 SEPT7P3-201ENST00000455017 621 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AL109741.2-201ENST00000455561 343 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 ACTG1P13-201ENST00000486987 1043 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MEIS3Q99687 AC011352.1-201ENST00000512300 793 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MTCO2P32-201ENST00000514865 403 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC022447.1-201ENST00000515358 464 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.32□□□□□ -1.72
MEIS3Q99687 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.32□□□□□ -1.72
MEIS3Q99687 AC095057.3-201ENST00000567102 1157 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MTCO1P40-201ENST00000574371 625 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 SNORD39.2-201ENST00000579995 76 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC006270.3-201ENST00000605967 1036 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MIR7851-201ENST00000610611 160 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AL355073.2-201ENST00000612106 557 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AL158063.1-201ENST00000615349 536 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC092656.1-203ENST00000624134 423 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC092159.4-201ENST00000624944 550 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 AC074029.4-201ENST00000624796 1859 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 MFSD8-233ENST00000641482 4860 ntBASIC4.32□□□□□ -1.72
MEIS3Q99687 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.32□□□□□ -1.72
MEIS3Q99687 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MEIS3Q99687 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MEIS3Q99687 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MEIS3Q99687 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MEIS3Q99687 RNU6-517P-201ENST00000384362 110 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 DNAJC19P6-201ENST00000401853 280 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.31□□□□□ -1.72
MEIS3Q99687 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 LINC01347-201ENST00000417964 355 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.31□□□□□ -1.72
MEIS3Q99687 RPL23AP76-201ENST00000441860 458 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AL591503.2-201ENST00000442314 1005 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AL357552.1-201ENST00000445254 415 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 MTCYBP3-201ENST00000445588 1137 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AL929288.2-201ENST00000446368 407 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 MTND4P18-201ENST00000447010 465 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC005002.1-201ENST00000447458 540 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.31□□□□□ -1.72
MEIS3Q99687 RPS4XP2-201ENST00000458402 793 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 RPS4XP10-201ENST00000465034 731 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 AC109927.2-201ENST00000506416 303 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 AC113347.3-201ENST00000509113 148 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 PCBP2P3-201ENST00000509726 843 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.31□□□□□ -1.72
MEIS3Q99687 RFPL4AP5-201ENST00000514977 504 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 NRON-201ENST00000517270 370 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.31□□□□□ -1.72
MEIS3Q99687 AC087465.1-201ENST00000560574 245 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC012435.1-202ENST00000568772 240 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 MTATP6P3-201ENST00000581686 676 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 ZNF415P1-201ENST00000582279 1166 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 VN1R7P-201ENST00000619242 903 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AL607023.1-201ENST00000620045 248 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 OR1S1-201ENST00000624470 978 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC006927.3-201ENST00000638789 384 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 AC000367.1-201ENST00000452711 1766 ntBASIC4.31□□□□□ -1.72
MEIS3Q99687 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MEIS3Q99687 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.31□□□□□ -1.72
MEIS3Q99687 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MEIS3Q99687 AC005832.2-201ENST00000538921 1430 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 AL513302.2-201ENST00000562313 1842 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.3□□□□□ -1.72
MEIS3Q99687 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.3□□□□□ -1.72
MEIS3Q99687 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MEIS3Q99687 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MEIS3Q99687 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MEIS3Q99687 Y_RNA.3-201ENST00000362331 103 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 RNU6-304P-201ENST00000364855 107 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.3□□□□□ -1.72
MEIS3Q99687 MIR23B-201ENST00000384832 97 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 BX323014.1-201ENST00000412876 237 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 Z99755.1-201ENST00000414048 380 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 RAD23BP2-201ENST00000416003 1207 ntBASIC4.3□□□□□ -1.72
MEIS3Q99687 AC027644.1-201ENST00000419595 298 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms