Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 AC005344.1-201ENST00000613391 459 ntBASIC6.51□□□□□ -1.37
PHOX2BQ99453 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
PHOX2BQ99453 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PHOX2BQ99453 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC109446.4-201ENST00000623235 2755 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC024587.1-201ENST00000505925 2157 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 Y_RNA.183-201ENST00000363882 113 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 RNA5SP132-201ENST00000364725 118 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 RNU6-933P-201ENST00000384424 107 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 MIR628-201ENST00000385229 95 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 CYCSP17-201ENST00000407870 315 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 RPL30P3-201ENST00000424262 333 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC016712.1-201ENST00000431088 378 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 BX276092.4-201ENST00000452056 248 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AL133445.1-201ENST00000467051 452 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 RN7SL187P-201ENST00000495587 303 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 Y_RNA.687-201ENST00000516558 91 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC012669.1-201ENST00000603209 283 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC064801.1-201ENST00000612025 407 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 AC091903.1-201ENST00000624322 454 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PHOX2BQ99453 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PHOX2BQ99453 IRF5P1-201ENST00000504852 2164 ntBASIC6.5□□□□□ -1.37
PHOX2BQ99453 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AP000547.3-204ENST00000588548 2523 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RNA5SP172-201ENST00000365061 118 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RAC1P3-201ENST00000416129 580 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC096920.1-201ENST00000423991 241 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RPL7L1P1-201ENST00000448259 785 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 OR2AQ1P-201ENST00000451972 200 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 CEACAMP6-201ENST00000452007 574 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC091153.1-201ENST00000466297 402 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC005798.1-201ENST00000513715 387 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RNU5B-3P-201ENST00000516601 115 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 RNU6-570P-201ENST00000517051 105 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC034114.1-201ENST00000520293 285 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 CTSLP2-201ENST00000580501 394 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC068768.2-201ENST00000602352 343 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AL161616.1-201ENST00000611867 286 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 FP236240.3-201ENST00000623061 327 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms