Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RGS17P1-201ENST00000423358 553 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AL353777.1-201ENST00000425552 326 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AL035551.1-201ENST00000446931 348 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC090804.1-201ENST00000448870 490 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AURKAPS2-201ENST00000454983 333 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 PPP1R2P5-201ENST00000457256 603 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC026410.2-201ENST00000460281 156 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC130509.1-201ENST00000464158 433 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 PABPC1P3-201ENST00000469174 459 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RPL31P50-201ENST00000471002 296 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RN7SL41P-201ENST00000476144 297 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC233702.1-201ENST00000482905 502 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 EIF4EP3-201ENST00000498782 656 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RNU4-49P-201ENST00000516080 140 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RNA5SP230-201ENST00000517039 122 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 SCOCP1-201ENST00000554676 349 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 SULT1C2P1-202ENST00000562418 459 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 MIR4660-201ENST00000583549 74 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC093227.2-201ENST00000589357 285 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RPL26P30-202ENST00000602923 645 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 MIR6780A-201ENST00000615089 68 ntBASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SYNGAP1Q96PV0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC079741.1-201ENST00000321498 212 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RPL7P26-201ENST00000333817 754 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 MIR369-201ENST00000362155 70 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 Y_RNA.144-201ENST00000363521 113 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 SNORA63C-201ENST00000364578 129 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-744P-201ENST00000365557 107 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-1316P-201ENST00000384242 108 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 Y_RNA.459-201ENST00000384251 102 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 SNORA48.4-201ENST00000391089 134 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 SNORA11.1-201ENST00000408133 129 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 PRELID3BP11-201ENST00000414230 479 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RPS15AP12-201ENST00000419498 388 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RPL7AP49-201ENST00000429522 581 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AL591438.1-201ENST00000433508 581 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RPS15AP9-201ENST00000439856 381 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC078785.3-201ENST00000476607 425 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC034222.1-201ENST00000494052 532 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC098976.1-201ENST00000513014 541 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-1220P-201ENST00000517126 108 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 COX6CP8-201ENST00000522620 226 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC093012.1-202ENST00000549403 582 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 HSPE1P3-201ENST00000559254 309 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC068714.1-201ENST00000559623 800 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 HMGB1P6-201ENST00000569046 646 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC115085.1-201ENST00000588924 229 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AC008737.2-201ENST00000599446 118 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 AL355802.3-201ENST00000607571 545 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SYNGAP1Q96PV0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms