Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 TIMM9P1-201ENST00000436122 256 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RPL23AP43-201ENST00000446445 471 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RNU7-27P-201ENST00000459281 62 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RPS17P15-201ENST00000475609 349 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RPL21P93-201ENST00000480465 489 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RPL32P33-201ENST00000487023 394 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 RN7SL184P-201ENST00000488308 297 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC083829.1-201ENST00000503756 657 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 EIF3KP3-201ENST00000514461 639 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC109329.1-201ENST00000518744 317 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AF279873.1-201ENST00000523393 313 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC011494.1-201ENST00000596454 237 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AP001485.1-201ENST00000604799 199 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC073657.2-201ENST00000605661 303 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC133644.2-201ENST00000608142 540 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 AL357559.1-201ENST00000622228 274 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 U6.114-201ENST00000636407 96 ntBASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
NKX2-3Q8TAU0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 MIR335-201ENST00000362173 94 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 Y_RNA.2-201ENST00000362330 96 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 Y_RNA.126-201ENST00000363382 111 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 U3.11-201ENST00000364476 212 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC126120.1-201ENST00000431082 470 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 HMGB3P21-201ENST00000452483 547 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AL161747.1-201ENST00000480068 358 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 RPL7P6-201ENST00000480903 738 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 TRBV5-2-201ENST00000489095 273 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AP003733.2-201ENST00000529409 171 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AL049839.1-201ENST00000556151 657 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC130454.1-201ENST00000622948 401 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AL445363.3-201ENST00000623080 671 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC097714.1-201ENST00000511272 1647 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AC002525.1-201ENST00000624392 1622 ntBASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
NKX2-3Q8TAU0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC092070.2-203ENST00000598377 3644 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 RNY3P13-201ENST00000365542 102 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 RNU6-729P-201ENST00000384399 107 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 HMGB1P20-201ENST00000402555 677 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL590290.1-201ENST00000405336 380 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 NME1P1-201ENST00000420914 382 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL662874.1-201ENST00000426065 230 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 RPS6P12-201ENST00000432491 726 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 H3F3BP1-201ENST00000440551 403 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AC114495.1-201ENST00000441274 436 ntBASIC6.84□□□□□ -1.31
NKX2-3Q8TAU0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms