Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RPL21P3-201ENST00000395517 478 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RN7SKP32-201ENST00000410167 303 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RPL36AP51-201ENST00000487216 318 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AL024509.2-201ENST00000493462 493 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 SUMO2P4-201ENST00000504193 276 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC005539.1-201ENST00000443768 1479 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC083843.2-201ENST00000568248 6253 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 LAP3P1-201ENST00000403648 294 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RNU2-2P-201ENST00000410396 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RPL31P12-201ENST00000422587 358 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.15-201ENST00000611544 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.16-201ENST00000613119 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.12-201ENST00000613778 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.20-201ENST00000613956 192 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.9-201ENST00000615427 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.11-201ENST00000616345 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.2-201ENST00000616535 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.3-201ENST00000617785 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.19-201ENST00000618602 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RNU2-1-201ENST00000618664 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.6-201ENST00000619225 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.5-201ENST00000619465 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 U2.10-201ENST00000620268 191 ntBASIC1.73□□□□□ -2.13
CSMD3Q7Z407 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CSMD3Q7Z407 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AL356292.1-201ENST00000283110 373 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 RNA5SP456-201ENST00000364002 114 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC069218.2-201ENST00000411665 344 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC002524.1-201ENST00000411687 547 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 NANOGP5-201ENST00000424456 877 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC007677.1-201ENST00000445757 515 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 ATP5J2P3-201ENST00000451550 258 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 SNRPGP9-201ENST00000456025 225 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 snoU13.18-201ENST00000459483 104 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 RPL30P9-201ENST00000465586 330 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC016687.1-201ENST00000482574 353 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 IGKV2D-23-201ENST00000518179 286 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AP001521.1-201ENST00000609150 300 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AL359893.1-201ENST00000447628 1580 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CSMD3Q7Z407 AC027514.1-201ENST00000588561 1603 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 MTND5P28-201ENST00000438005 1594 ntBASIC1.72□□□□□ -2.13
CSMD3Q7Z407 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
CSMD3Q7Z407 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AL365396.1-201ENST00000430854 671 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AC105918.1-201ENST00000474399 838 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 VWA8P1-201ENST00000510889 176 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AC112673.1-201ENST00000513168 575 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 GNAI2P1-201ENST00000541815 315 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AP000919.1-202ENST00000581139 1264 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AC022960.2-201ENST00000616300 666 ntBASIC1.71□□□□□ -2.13
CSMD3Q7Z407 AC138915.3-201ENST00000562908 1389 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 MAPK10-373ENST00000641983 6772 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AL024474.1-201ENST00000404655 591 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC006960.1-201ENST00000419980 153 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC010881.1-201ENST00000433830 235 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 TRAV11-201ENST00000539512 339 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AL355836.1-201ENST00000555951 870 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC103710.2-201ENST00000609912 942 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms