Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RAD17P1-201ENST00000418130 2042 ntBASIC4.34□□□□□ -1.71
RNF44Q7L0R7 AC025031.4-201ENST00000621248 3271 ntBASIC4.34□□□□□ -1.72
RNF44Q7L0R7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF44Q7L0R7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 MTND5P33-201ENST00000571250 1450 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC092435.4-201ENST00000623012 4159 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 FRG1BP-201ENST00000278882 761 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RNU6-192P-201ENST00000391253 100 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RNU2-47P-201ENST00000410649 186 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC078974.1-201ENST00000411597 223 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RPS3AP3-201ENST00000411933 242 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RPL7AP25-201ENST00000423357 805 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 CHIAP3-201ENST00000423668 1133 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC108734.1-201ENST00000439549 399 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 HMGB3P9-201ENST00000441799 583 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC244505.5-201ENST00000443639 207 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC112653.1-201ENST00000443851 386 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AP1S2P1-201ENST00000457344 379 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL445433.1-201ENST00000457507 257 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 snoU13.1-201ENST00000459157 104 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL591473.1-201ENST00000464297 313 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 ST13P14-201ENST00000474095 734 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 CDC42P4-201ENST00000510507 563 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AP003392.2-201ENST00000527269 208 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RPL21P5-201ENST00000554662 472 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 RNF138P2-201ENST00000603490 592 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC091805.2-201ENST00000603848 235 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AL359999.1-201ENST00000604513 294 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC055876.5-201ENST00000605667 259 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 OR10AB1P-201ENST00000609613 938 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC012409.3-201ENST00000611343 981 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC005332.10-201ENST00000612725 619 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AP005019.3-201ENST00000620418 560 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC099654.13-201ENST00000639774 207 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 AC027290.2-201ENST00000623210 18662 ntBASIC4.33□□□□□ -1.72
RNF44Q7L0R7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF44Q7L0R7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 MTND5P29-201ENST00000458676 1807 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 MTND4P5-201ENST00000435821 1374 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RNU1-32P-201ENST00000363937 159 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC136624.1-201ENST00000400791 413 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 ELOCP19-201ENST00000411919 318 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AL031779.1-201ENST00000415663 330 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 MTCO1P21-201ENST00000416634 589 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RPL21P91-201ENST00000429231 479 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC068287.1-201ENST00000430283 295 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 SNORD121B-201ENST00000458838 81 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 SNORD108-201ENST00000459332 71 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC011825.1-201ENST00000484967 388 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC013356.1-201ENST00000489027 564 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RPS4XP18-201ENST00000495480 763 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC096751.1-202ENST00000502691 1067 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF44Q7L0R7 AC017037.2-201ENST00000513850 890 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RNU6-720P-201ENST00000516363 108 ntBASIC4.32□□□□□ -1.72
RNF44Q7L0R7 RNU6-201P-201ENST00000517100 61 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms