Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC012254.3-201ENST00000591183 2117 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC010168.2-201ENST00000562691 5428 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AL139276.1-201ENST00000311910 1001 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MIR375-201ENST00000362103 64 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MIR433-201ENST00000384837 93 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MIR143-201ENST00000385300 106 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC096920.1-201ENST00000423991 241 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC016027.4-201ENST00000450866 277 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 SRI-210ENST00000490437 570 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 RPL7P47-201ENST00000497299 556 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC105758.1-201ENST00000506038 399 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC021146.3-201ENST00000511911 260 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 RNU6-65P-201ENST00000516332 98 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC022404.1-201ENST00000555320 273 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC007225.2-201ENST00000562529 256 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MIR5582-201ENST00000579697 68 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC108706.1-201ENST00000611053 297 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AL159153.1-201ENST00000619688 317 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC112243.1-201ENST00000623949 3851 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 RBBP8P1-201ENST00000449447 1844 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 AC016583.1-201ENST00000624221 2431 ntBASIC6.64□□□□□ -1.35
TRAF7Q6Q0C0 MFSD8-219ENST00000641228 2559 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 SELENOWP1-201ENST00000322792 252 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 Y_RNA.76-201ENST00000362931 109 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RNA5SP350-201ENST00000363298 111 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 Y_RNA.127-201ENST00000363386 109 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RNU6-1020P-201ENST00000363684 107 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 Y_RNA.367-201ENST00000365544 101 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 HIGD1AP11-201ENST00000438361 280 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RPL23AP89-201ENST00000439324 255 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RPS26P56-201ENST00000444468 240 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AP001086.1-201ENST00000494882 321 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RN7SKP99-201ENST00000517028 307 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 HMGN1P28-201ENST00000521340 364 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 RPL21P12-201ENST00000559810 515 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 SUB1P3-201ENST00000564581 315 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AL137003.2-201ENST00000606924 2538 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AP001541.1-201ENST00000623322 1904 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 AL161901.1-201ENST00000624954 3425 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 CYP3A51P-201ENST00000633513 256 ntBASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRAF7Q6Q0C0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRAF7Q6Q0C0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms