Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC005008.1-201ENST00000456151 612 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC098657.3-201ENST00000620434 263 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 CTSLP2-204ENST00000629029 392 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AL035405.1-201ENST00000400795 710 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC009237.2-201ENST00000421358 284 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC074367.1-201ENST00000438685 1125 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 ELOCP8-201ENST00000439309 332 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 ELOCP15-201ENST00000442090 332 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 DUXAP8-207ENST00000456786 622 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 MTCYBP28-201ENST00000566728 1132 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC090970.3-201ENST00000612566 866 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC016542.2-201ENST00000624201 619 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC010480.1-201ENST00000624823 684 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AL732372.2-225ENST00000642124 456 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 MTCO1P22-201ENST00000604619 1360 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC013410.1-201ENST00000436223 1232 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AL591719.1-201ENST00000444669 744 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC107032.1-201ENST00000485945 480 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 RNU1-143P-201ENST00000516296 146 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 RN7SL793P-201ENST00000583259 296 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 U1.23-201ENST00000610293 146 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 RNU1-68P-201ENST00000615382 146 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC022149.2-201ENST00000621061 203 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 U1.39-201ENST00000621562 146 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 MFSD8-233ENST00000641482 4860 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 RNA5SP52-201ENST00000362448 134 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 KCTD9P5-201ENST00000504141 1170 ntBASIC1.53□□□□□ -2.16
UBR4Q5T4S7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.53□□□□□ -2.16
UBR4Q5T4S7 NEAT1-202ENST00000501122 22743 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 VN1R8P-201ENST00000407739 893 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 ETF1P3-201ENST00000430422 1160 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 HSPE1P28-201ENST00000443139 211 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 MTCO3P11-201ENST00000455103 774 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 AC004801.2-202ENST00000463559 283 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 RNA5SP436-201ENST00000516020 115 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 MRPS21P9-201ENST00000571150 257 ntBASIC1.53□□□□□ -2.17
UBR4Q5T4S7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
UBR4Q5T4S7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MIR409-201ENST00000362237 79 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 CST2P1-201ENST00000425770 87 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 RPL7P5-201ENST00000471472 736 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MAGOH2P-202ENST00000584384 429 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 RPS12P23-201ENST00000419579 400 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 RPS15AP1-201ENST00000457423 391 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC092628.2-201ENST00000622492 339 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC009039.2-201ENST00000624524 529 ntBASIC1.52□□□□□ -2.17
UBR4Q5T4S7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR4Q5T4S7 AL356057.3-201ENST00000402607 340 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms