Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC006445.2-201ENST00000510061 472 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC093755.1-201ENST00000512950 1023 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AL356274.1-201ENST00000617064 410 ntBASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.26□□□□□ -1.89
RFX7Q2KHR2 AL672167.1-206ENST00000356293 943 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 RNU1-100P-201ENST00000365255 165 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AL356057.1-202ENST00000402263 756 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC093151.1-201ENST00000427711 313 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC128713.1-201ENST00000471495 306 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 TRBV12-1-201ENST00000479785 344 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AP001180.3-201ENST00000582221 145 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC084035.1-201ENST00000634543 607 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC110774.1-201ENST00000623567 2018 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC109315.1-201ENST00000584143 1347 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 SNORA31-201ENST00000362607 130 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 MIR592-201ENST00000384959 97 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 RPL31P45-201ENST00000419532 356 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC010627.1-201ENST00000503819 1294 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC005921.1-201ENST00000510589 286 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 MTND2P17-201ENST00000550281 688 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC091544.4-201ENST00000555268 342 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.25□□□□□ -1.89
RFX7Q2KHR2 FRG1DP-201ENST00000635586 771 ntBASIC3.25□□□□□ -1.89
RFX7Q2KHR2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC110792.3-201ENST00000595906 1614 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC117529.2-201ENST00000512159 2068 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 RNA5SP508-201ENST00000411327 119 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 RPL7L1P13-201ENST00000511702 739 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 RNU6-347P-201ENST00000516658 105 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC106734.1-201ENST00000568646 663 ntBASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.24□□□□□ -1.89
RFX7Q2KHR2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 RN7SKP123-201ENST00000410732 291 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 RNA5SP344-201ENST00000411081 104 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 RPS20P25-201ENST00000412447 352 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 OR2B8P-201ENST00000432841 938 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 NEK4P1-201ENST00000433383 879 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 RPS7P5-201ENST00000441482 581 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 ST13P20-201ENST00000447996 1065 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 GSTA11P-201ENST00000452866 669 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 AC103975.1-201ENST00000482506 483 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 SERPINE4P-201ENST00000554978 281 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 AC010735.1-201ENST00000567305 1026 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 MIR4635-201ENST00000583759 79 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 AC112503.1-201ENST00000608436 391 ntBASIC3.23□□□□□ -1.89
RFX7Q2KHR2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.23□□□□□ -1.89
RFX7Q2KHR2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFX7Q2KHR2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms