Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDK3Q00526 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CDK3Q00526 RNU6-263P-201ENST00000363811 107 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 RHOT1P2-201ENST00000366423 333 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CDK3Q00526 FNDC3CP-201ENST00000420795 1155 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AL591419.1-201ENST00000427423 339 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 AC011742.1-201ENST00000431448 434 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 MTCYBP31-201ENST00000438855 1122 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 MTCYBP34-201ENST00000439552 670 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK3Q00526 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 AL500522.2-201ENST00000448562 343 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 RSL24D1P3-201ENST00000449255 495 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 NANOGP10-201ENST00000453325 895 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 TMEM251P1-201ENST00000503717 318 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 RNA5SP164-201ENST00000516533 110 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 RN7SKP116-201ENST00000516902 319 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC090281.1-201ENST00000523019 276 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 UBTFL10-201ENST00000528532 562 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.79□□□□□ -1.8
CDK3Q00526 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 HSPE1P3-201ENST00000559254 309 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK3Q00526 AC107954.1-201ENST00000565906 727 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK3Q00526 AL353778.1-201ENST00000603149 408 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC004987.4-201ENST00000603383 338 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC083899.3-201ENST00000603413 594 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC245389.1-201ENST00000605141 529 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AL139344.1-201ENST00000605228 195 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC112220.3-201ENST00000605502 502 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 OR6R2P-201ENST00000609216 300 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AL450489.1-201ENST00000612071 468 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC091304.6-201ENST00000619761 202 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 AC120349.3-201ENST00000624377 529 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK3Q00526 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
CDK3Q00526 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CDK3Q00526 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK3Q00526 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK3Q00526 MTND4P34-201ENST00000572715 1371 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK3Q00526 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK3Q00526 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDK3Q00526 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK3Q00526 SNORA4.1-201ENST00000364263 144 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 RNU6-761P-201ENST00000384148 107 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 U8.11-201ENST00000384699 133 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 U8.12-201ENST00000384701 133 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 MIR93-201ENST00000385024 80 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 RAC1P3-201ENST00000416129 580 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 NANOGP6-201ENST00000429190 847 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AC018644.1-201ENST00000429934 551 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 RPL23AP74-201ENST00000437246 471 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AL354941.1-201ENST00000438600 464 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 MTND2P19-201ENST00000449129 1012 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 USP9YP34-201ENST00000453983 808 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 AL109741.2-201ENST00000455561 343 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 U8.18-201ENST00000459285 133 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AC097493.1-201ENST00000463958 372 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 OR4R3P-201ENST00000525084 838 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 DEFB131D-201ENST00000526803 184 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AP003385.6-201ENST00000531603 374 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK3Q00526 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK3Q00526 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK3Q00526 AL139395.1-201ENST00000603662 160 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 HMGN2P28-201ENST00000606102 262 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK3Q00526 AL121772.2-201ENST00000614331 297 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AL607023.1-201ENST00000620045 248 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 AC039056.2-201ENST00000622261 511 ntBASIC3.78□□□□□ -1.8
CDK3Q00526 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDK3Q00526 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK3Q00526 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms