Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 FO393419.3-201ENST00000428741 282 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 RPL21P112-201ENST00000434403 463 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC127537.2-201ENST00000439258 465 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AL513343.1-201ENST00000451818 792 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXC5Q00444 RPL27AP5-201ENST00000469428 449 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC012181.1-201ENST00000479895 423 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 RPL31P13-201ENST00000484151 370 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC090543.1-201ENST00000492168 485 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 SCGB1D5P-201ENST00000515134 247 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC104986.1-201ENST00000517978 436 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC5Q00444 COX6B1P6-201ENST00000522347 255 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC104115.2-201ENST00000523026 687 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC004923.2-201ENST00000529649 369 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC139103.1-201ENST00000534696 1030 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AL121603.1-201ENST00000553815 142 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AP000787.2-201ENST00000604432 568 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC090425.2-201ENST00000608818 501 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AL359535.1-201ENST00000612100 1087 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AL355493.4-201ENST00000618530 292 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC091953.5-201ENST00000622919 233 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 LINC00216-201ENST00000623548 1126 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC5Q00444 AP003122.5-201ENST00000527668 3766 ntBASIC2.64□□□□□ -1.99
HOXC5Q00444 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC5Q00444 AC022031.1-201ENST00000585985 2593 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC5Q00444 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC5Q00444 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HOXC5Q00444 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC5Q00444 MIR422A-201ENST00000362286 90 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 SNORA7.2-201ENST00000364446 145 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC5Q00444 MIR512-1-201ENST00000384913 84 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 BTBD10P2-201ENST00000404779 676 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC244098.2-201ENST00000422068 99 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AL512649.1-201ENST00000428997 581 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC5Q00444 TRIM60P18-201ENST00000441518 828 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXC5Q00444 AC104978.1-201ENST00000449387 391 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 Z99714.1-201ENST00000450463 807 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC104308.1-201ENST00000454621 333 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC5Q00444 RN7SL297P-201ENST00000483161 293 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 RPS4XP13-201ENST00000483219 789 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXC5Q00444 AC016065.2-201ENST00000514530 444 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC008494.2-201ENST00000514544 370 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 RN7SKP283-201ENST00000517197 270 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 HAUS1P3-201ENST00000523909 662 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC5Q00444 OR4A45P-201ENST00000529954 901 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC5Q00444 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXC5Q00444 MIR3690-201ENST00000580266 75 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC012493.2-201ENST00000595083 291 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC006539.2-201ENST00000601729 572 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC5Q00444 AC131902.3-201ENST00000611767 581 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
HOXC5Q00444 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
HOXC5Q00444 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
HOXC5Q00444 MTCO1P24-201ENST00000515438 1558 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 MIR142-201ENST00000384835 87 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 RPL23AP47-201ENST00000408017 460 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 SNORA11C-201ENST00000408532 129 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC5Q00444 EI24P1-201ENST00000416584 867 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC5Q00444 VDAC1P3-201ENST00000434069 851 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 HMGN2P20-201ENST00000437531 273 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 XKRYP6-201ENST00000440468 1116 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 XKRYP3-201ENST00000442113 1116 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AL592437.1-201ENST00000443781 492 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 Z77249.1-201ENST00000444622 1175 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AL590639.1-201ENST00000456484 337 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 HMGN2P16-201ENST00000456802 261 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 VN1R17P-201ENST00000472048 1090 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 RPS27AP9-201ENST00000477681 438 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 MTND3P6-201ENST00000485242 339 ntBASIC2.62□□□□□ -1.99
HOXC5Q00444 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC5Q00444 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC5Q00444 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC5Q00444 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms