Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC126121.1-201ENST00000482313 553 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CKS1BP61024 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC133963.2-201ENST00000513686 578 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.17□□□□□ -2.06
CKS1BP61024 HMGB1P41-201ENST00000520234 440 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC008562.1-201ENST00000521763 330 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC007991.1-201ENST00000522680 631 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 ACTR3BP3-201ENST00000565577 979 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.17□□□□□ -2.06
CKS1BP61024 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.17□□□□□ -2.06
CKS1BP61024 OR4G1P-201ENST00000588632 938 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC067852.3-201ENST00000589177 561 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.17□□□□□ -2.06
CKS1BP61024 AC135178.6-201ENST00000605314 398 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AC012557.1-201ENST00000607115 611 ntBASIC2.17□□□□□ -2.06
CKS1BP61024 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.17□□□□□ -2.06
CKS1BP61024 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.17□□□□□ -2.06
CKS1BP61024 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CKS1BP61024 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CKS1BP61024 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.17□□□□□ -2.06
CKS1BP61024 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CKS1BP61024 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CKS1BP61024 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 SGO1P2-201ENST00000429458 1589 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS1BP61024 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.16□□□□□ -2.06
CKS1BP61024 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CKS1BP61024 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CKS1BP61024 SNORA25.6-201ENST00000364121 118 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CKS1BP61024 MIR218-2-201ENST00000385006 110 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 RPL31P1-201ENST00000398116 372 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 RNA5SP274-201ENST00000410484 108 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.16□□□□□ -2.06
CKS1BP61024 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 AC034236.1-201ENST00000469891 373 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 AC091959.2-201ENST00000477363 321 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 SCARNA20.6-201ENST00000517251 106 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.16□□□□□ -2.06
CKS1BP61024 AC087808.1-201ENST00000520501 361 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.16□□□□□ -2.06
CKS1BP61024 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 MIR4276-201ENST00000584832 70 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 AC104237.2-201ENST00000612456 443 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.16□□□□□ -2.06
CKS1BP61024 AC110079.1-202ENST00000635213 138 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.16□□□□□ -2.06
CKS1BP61024 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CKS1BP61024 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS1BP61024 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CKS1BP61024 ASNSP3-201ENST00000451989 1306 ntBASIC2.16□□□□□ -2.06
CKS1BP61024 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CKS1BP61024 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CKS1BP61024 SET-203ENST00000372688 801 ntTSL 2 BASIC2.15□□□□□ -2.07
CKS1BP61024 RNU6-31P-201ENST00000384388 108 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 RNU6-452P-201ENST00000384406 107 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 U8.11-201ENST00000384699 133 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 U8.12-201ENST00000384701 133 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 RN7SKP263-201ENST00000411194 309 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 RSL24D1P6-201ENST00000426934 401 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 MTCO1P45-201ENST00000431457 267 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.15□□□□□ -2.07
CKS1BP61024 AL392003.1-201ENST00000434394 243 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 RPS15AP7-201ENST00000439294 405 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 AC011753.1-201ENST00000451001 220 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS1BP61024 U8.18-201ENST00000459285 133 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CKS1BP61024 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.15□□□□□ -2.07
CKS1BP61024 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 AC025768.1-201ENST00000510057 267 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.15□□□□□ -2.07
CKS1BP61024 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 COX6B1P6-201ENST00000522347 255 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.15□□□□□ -2.07
CKS1BP61024 HIGD1AP1-201ENST00000550979 275 ntBASIC2.15□□□□□ -2.07
CKS1BP61024 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms