Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC104978.1-201ENST00000449387 391 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN18P56856 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN18P56856 AC104308.1-201ENST00000454621 333 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN18P56856 ACTG1P13-201ENST00000486987 1043 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 FCF1P3-201ENST00000496394 590 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN18P56856 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN18P56856 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN18P56856 RNU6-711P-201ENST00000517255 106 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 CYP2C60P-201ENST00000566088 139 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 MTCO3P24-201ENST00000572729 782 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 SNORD84-203ENST00000584275 78 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN18P56856 KATNBL1P5-201ENST00000605015 517 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AL365503.1-201ENST00000605247 905 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC073968.1-201ENST00000618594 637 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC106730.3-201ENST00000624568 641 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC097372.4-201ENST00000625025 466 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN18P56856 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN18P56856 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN18P56856 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN18P56856 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CLDN18P56856 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
CLDN18P56856 AL513302.2-201ENST00000562313 1842 ntBASIC3.03□□□□□ -1.93
CLDN18P56856 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 MTND5P31-201ENST00000419366 1374 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 Z83843.1-201ENST00000604070 3685 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 RNU6-650P-201ENST00000365658 111 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 KRR1P1-201ENST00000419430 803 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC233981.1-201ENST00000423224 461 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC006548.1-201ENST00000427470 102 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN18P56856 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 AC097262.1-201ENST00000452559 548 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN18P56856 TPRKBP1-201ENST00000456243 481 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 OR5H5P-201ENST00000503164 928 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC010468.3-201ENST00000508225 458 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.02□□□□□ -1.93
CLDN18P56856 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 TRAV37-201ENST00000553906 342 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC005476.1-201ENST00000554427 397 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC087481.2-201ENST00000565492 330 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC008962.1-201ENST00000605729 304 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AL590240.3-201ENST00000621416 943 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN18P56856 AC098679.5-201ENST00000624394 571 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 CR381572.1-201ENST00000625098 102 ntBASIC3.02□□□□□ -1.93
CLDN18P56856 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLDN18P56856 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN18P56856 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLDN18P56856 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN18P56856 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CLDN18P56856 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN18P56856 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLDN18P56856 AC073346.2-201ENST00000624724 2058 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN18P56856 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLDN18P56856 SNORD56.4-201ENST00000363883 71 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 NPM1P10-201ENST00000398310 865 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 MTND4LP20-201ENST00000402379 270 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 RPS6P14-201ENST00000425165 719 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 AL009174.1-201ENST00000426577 416 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 TRIAP1P1-201ENST00000427062 225 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN18P56856 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN18P56856 AL591503.2-201ENST00000442314 1005 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 AC008264.1-201ENST00000447612 367 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 AC004022.1-201ENST00000447766 1066 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 AL034418.1-201ENST00000448675 860 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN18P56856 BTF3P5-201ENST00000457252 467 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 RPS4XP2-201ENST00000458402 793 ntBASIC3.01□□□□□ -1.93
CLDN18P56856 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms