Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CDH4P55283 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH4P55283 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CDH4P55283 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH4P55283 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CDH4P55283 SNORD65C-201ENST00000390962 71 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AL583834.1-201ENST00000406943 343 ntBASIC3.37□□□□□ -1.87
CDH4P55283 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
CDH4P55283 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
CDH4P55283 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
CDH4P55283 RNU2-71P-201ENST00000411395 189 ntBASIC3.37□□□□□ -1.87
CDH4P55283 KRR1P1-201ENST00000419430 803 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC104978.1-201ENST00000449387 391 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC010285.1-201ENST00000470580 392 ntBASIC3.37□□□□□ -1.87
CDH4P55283 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH4P55283 AC112518.2-201ENST00000508565 425 ntBASIC3.37□□□□□ -1.87
CDH4P55283 MTCO3P44-201ENST00000510977 541 ntBASIC3.37□□□□□ -1.87
CDH4P55283 PRELID3BP4-201ENST00000515476 571 ntBASIC3.37□□□□□ -1.87
CDH4P55283 RN7SKP60-201ENST00000516985 239 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH4P55283 AP001207.1-201ENST00000524051 481 ntBASIC3.37□□□□□ -1.87
CDH4P55283 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH4P55283 AC074051.3-201ENST00000570238 358 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH4P55283 BPTFP1-201ENST00000579209 492 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH4P55283 RN7SL622P-201ENST00000585292 275 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AL669831.4-202ENST00000590817 238 ntBASIC3.37□□□□□ -1.87
CDH4P55283 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH4P55283 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH4P55283 AC097460.3-201ENST00000623099 442 ntBASIC3.37□□□□□ -1.87
CDH4P55283 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH4P55283 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
CDH4P55283 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH4P55283 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH4P55283 MTND5P31-201ENST00000419366 1374 ntBASIC3.37□□□□□ -1.87
CDH4P55283 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDH4P55283 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDH4P55283 RNA5SP56-201ENST00000410277 118 ntBASIC3.36□□□□□ -1.87
CDH4P55283 HSFY1P1-201ENST00000423928 1178 ntBASIC3.36□□□□□ -1.87
CDH4P55283 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 GTF2IP12-201ENST00000456547 356 ntBASIC3.36□□□□□ -1.87
CDH4P55283 RPL21P104-201ENST00000464143 478 ntBASIC3.36□□□□□ -1.87
CDH4P55283 PRDX3P4-201ENST00000470828 747 ntBASIC3.36□□□□□ -1.87
CDH4P55283 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH4P55283 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH4P55283 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH4P55283 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH4P55283 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 RPL21P12-201ENST00000559810 515 ntBASIC3.36□□□□□ -1.87
CDH4P55283 NIFKP8-201ENST00000560500 874 ntBASIC3.36□□□□□ -1.87
CDH4P55283 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 AL606834.2-201ENST00000602954 668 ntBASIC3.36□□□□□ -1.87
CDH4P55283 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH4P55283 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 AL590282.1-201ENST00000610379 1136 ntBASIC3.36□□□□□ -1.87
CDH4P55283 MIR7112-201ENST00000616126 65 ntBASIC3.36□□□□□ -1.87
CDH4P55283 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH4P55283 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.36□□□□□ -1.87
CDH4P55283 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH4P55283 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH4P55283 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 RNU6-339P-201ENST00000384310 107 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AL357075.1-201ENST00000404107 726 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH4P55283 AC233981.1-201ENST00000423224 461 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH4P55283 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 AC006028.1-201ENST00000438379 402 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH4P55283 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
CDH4P55283 RPL7P52-201ENST00000449200 742 ntBASIC3.35□□□□□ -1.87
CDH4P55283 MRPS31P2-201ENST00000451581 518 ntBASIC3.35□□□□□ -1.87
CDH4P55283 NAP1L1P3-201ENST00000462291 880 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.35□□□□□ -1.87
CDH4P55283 RPL12P22-201ENST00000519073 490 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms